Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 401 to 425 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
255568
255581
ACAGCG
13
-
2
GCTGTC
flgK
254361
256364
+
Genic
-1207
NZ_LR595896.1
256060
256072
AGCGCG
12
-
2
CGCGCT
flgK
254361
256364
+
Genic
-1699
NZ_LR595896.1
256953
256965
ACGGGC
12
-
2
TGCCCG
flgL
256380
257612
+
Genic
-573
NZ_LR595896.1
256981
256997
ACGGGC
16
+
2
CACGGG
flgL
256380
257612
+
Genic
-601
NZ_LR595896.1
257525
257537
AGCTGC
12
+
2
CTGCAG
flgL
256380
257612
+
Genic
-1145
NZ_LR595896.1
257568
257580
AGATGC
12
+
2
TGCAGA
flgL
256380
257612
+
Genic
-1188
NZ_LR595896.1
258499
258511
AGCGCG
12
-
2
CGCTCG
UKMR15_RS01225
257980
259287
+
Genic
-519
NZ_LR595896.1
258968
258981
ATCGCG
13
+
2
GATCGC
UKMR15_RS01225
257980
259287
+
Genic
-988
NZ_LR595896.1
259257
259269
AAGGAG
12
+
2
AAGGAG
UKMR15_RS01225
257980
259287
+
Genic
-1277
NZ_LR595896.1
259396
259415
ATCGCC
19
+
3
GCCATC
UKMR15_RS01230
259502
260383
-
Intergenic
87
NZ_LR595896.1
259416
259433
ATCGCC
17
+
2
CATCGC
UKMR15_RS01230
259502
260383
-
Intergenic
69
NZ_LR595896.1
259661
259673
AGCGGC
12
+
2
AGCGGC
UKMR15_RS01230
259502
260383
-
Genic
-159
NZ_LR595896.1
260855
260869
CCG
14
-
4
GCG
UKMR15_RS01235
260481
261080
+
Genic
-374
NZ_LR595896.1
261224
261236
AGCGCG
12
-
2
TCGCGC
UKMR15_RS01240
261077
261607
+
Genic
-147
NZ_LR595896.1
261945
261957
ACGCGC
12
-
2
GCGCGT
UKMR15_RS01245
261938
262276
-
Genic
-7
NZ_LR595896.1
262591
262603
AAGGTG
12
+
2
TGAAGG
UKMR15_RS01250
262390
262734
+
Genic
-201
NZ_LR595896.1
263245
263257
AGCGCG
12
-
2
CGCGCT
UKMR15_RS01255
262752
263492
+
Genic
-493
NZ_LR595896.1
263420
263433
CCGGCG
13
+
2
GGCGCC
UKMR15_RS01255
262752
263492
+
Genic
-668
NZ_LR595896.1
263555
263567
ACGCCT
12
-
2
AGGCGT
UKMR15_RS01255
262752
263492
+
Intergenic
-803
NZ_LR595896.1
263979
263991
CCGCGG
12
+
2
CGGCCG
UKMR15_RS01260
264033
265166
+
Intergenic
42
NZ_LR595896.1
264585
264597
CCCGCG
12
-
2
CGGGCG
UKMR15_RS01260
264033
265166
+
Genic
-552
NZ_LR595896.1
265247
265261
ACCGGC
14
-
2
GCCGGT
UKMR15_RS01265
265324
266145
-
Intergenic
63
NZ_LR595896.1
267949
267961
AACGCG
12
-
2
TTCGCG
UKMR15_RS01275
267136
268116
-
Genic
-813
NZ_LR595896.1
268429
268441
ACGCCC
12
+
2
CCACGC
hpnI
268199
269446
-
Genic
-230
NZ_LR595896.1
268469
268485
AGCGCG
16
+
2
AGCGCG
hpnI
268199
269446
-
Genic
-270