Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 626 to 650 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
393623
393696
AAGGC
73
+
14
GGCAA
UKMR15_RS01810
392356
393600
+
Intergenic
-1267
NZ_LR595896.1
393695
393708
ACGGG
13
+
2
CGGGA
UKMR15_RS01810
392356
393600
+
Intergenic
-1339
NZ_LR595896.1
396447
396460
AGGCGC
13
-
2
CGCCTG
UKMR15_RS01830
396277
397047
-
Genic
-170
NZ_LR595896.1
397378
397391
ACGCG
13
-
2
GCGTC
UKMR15_RS01835
397053
398012
-
Genic
-325
NZ_LR595896.1
397411
397425
CCGCGG
14
+
2
CGGCCG
UKMR15_RS01835
397053
398012
-
Genic
-358
NZ_LR595896.1
398242
398254
AATGC
12
+
2
GCAAT
UKMR15_RS01840
398393
399280
-
Intergenic
139
NZ_LR595896.1
398272
398286
ACGCC
14
-
2
GTGGC
UKMR15_RS01840
398393
399280
-
Intergenic
107
NZ_LR595896.1
398453
398465
ACGCCG
12
-
2
GCGTCG
UKMR15_RS01840
398393
399280
-
Genic
-60
NZ_LR595896.1
398552
398564
AGCGCG
12
+
2
AGCGCG
UKMR15_RS01840
398393
399280
-
Genic
-159
NZ_LR595896.1
398907
398919
AGCGCC
12
+
2
GCCAGC
UKMR15_RS01840
398393
399280
-
Genic
-514
NZ_LR595896.1
401588
401600
CCGCG
12
+
2
CGCGC
UKMR15_RS01850
401680
402804
+
Intergenic
80
NZ_LR595896.1
401596
401609
CCGG
13
+
3
GCCG
UKMR15_RS01850
401680
402804
+
Intergenic
71
NZ_LR595896.1
401760
401776
AGCGCG
16
-
2
GCGCTC
UKMR15_RS01850
401680
402804
+
Genic
-80
NZ_LR595896.1
404542
404554
CCCGGG
12
+
2
CCGGGC
UKMR15_RS01860
403667
404596
+
Genic
-875
NZ_LR595896.1
404662
404676
AGCGCG
14
-
2
GCGCTC
UKMR15_RS01865
404615
405253
+
Genic
-47
NZ_LR595896.1
404692
404705
AGCGCG
13
+
2
GCGAGC
UKMR15_RS01865
404615
405253
+
Genic
-77
NZ_LR595896.1
404957
404969
CCGCG
12
-
2
GGCGC
UKMR15_RS01865
404615
405253
+
Genic
-342
NZ_LR595896.1
405648
405660
AGATCG
12
-
2
ATCTCG
UKMR15_RS01870
405285
406496
+
Genic
-363
NZ_LR595896.1
406090
406102
AGCGCG
12
-
2
CGCGCT
UKMR15_RS01870
405285
406496
+
Genic
-805
NZ_LR595896.1
406264
406278
AGCGCG
14
-
2
CGCGCT
UKMR15_RS01870
405285
406496
+
Genic
-979
NZ_LR595896.1
406436
406452
CCGCG
16
-
3
GCGCG
UKMR15_RS01870
405285
406496
+
Genic
-1151
NZ_LR595896.1
406750
406763
CCCGCG
13
-
2
CGCGGG
UKMR15_RS01875
406614
406931
+
Genic
-136
NZ_LR595896.1
406813
406826
ACG
13
-
4
CGT
UKMR15_RS01875
406614
406931
+
Genic
-199
NZ_LR595896.1
407071
407083
CCGCG
12
+
2
GCCGC
UKMR15_RS01880
406979
407623
+
Genic
-92
NZ_LR595896.1
407099
407114
ATCCGC
15
+
2
CGCATC
UKMR15_RS01880
406979
407623
+
Genic
-120