Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 676 to 700 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
425586
425598
AGCGCG
12
-
2
TCGCGC
UKMR15_RS01960
425457
425762
+
Genic
-129
NZ_LR595896.1
425640
425652
ACGCCG
12
-
2
GCGTCG
UKMR15_RS01960
425457
425762
+
Genic
-183
NZ_LR595896.1
425868
425880
CCG
12
+
4
CGC
UKMR15_RS01965
425774
427489
+
Genic
-94
NZ_LR595896.1
425927
425940
AAGACG
13
-
2
TCTTCG
UKMR15_RS01965
425774
427489
+
Genic
-153
NZ_LR595896.1
426480
426494
AGCGCG
14
-
2
CGCGCT
UKMR15_RS01965
425774
427489
+
Genic
-706
NZ_LR595896.1
427233
427247
AGCCCG
14
-
2
CGGGCT
UKMR15_RS01965
425774
427489
+
Genic
-1459
NZ_LR595896.1
427303
427316
ACGCGC
13
+
2
CACGCG
UKMR15_RS01965
425774
427489
+
Genic
-1529
NZ_LR595896.1
429191
429203
CCCGG
12
-
2
GGGCC
UKMR15_RS01975
429146
431179
+
Genic
-45
NZ_LR595896.1
429577
429589
ACGCGC
12
+
2
CACGCG
UKMR15_RS01975
429146
431179
+
Genic
-431
NZ_LR595896.1
429999
430013
AGCGGC
14
-
2
GCCGCT
UKMR15_RS01975
429146
431179
+
Genic
-853
NZ_LR595896.1
430152
430164
ACGCCG
12
+
2
CGACGC
UKMR15_RS01975
429146
431179
+
Genic
-1006
NZ_LR595896.1
430757
430770
CCG
13
+
4
CCG
UKMR15_RS01975
429146
431179
+
Genic
-1611
NZ_LR595896.1
431324
431337
AACCG
13
-
2
GGTTC
UKMR15_RS01980
431228
432583
+
Genic
-96
NZ_LR595896.1
431798
431810
CCGCG
12
+
2
CGCCG
UKMR15_RS01980
431228
432583
+
Genic
-570
NZ_LR595896.1
432031
432043
AGCCG
12
-
2
CGGCT
UKMR15_RS01980
431228
432583
+
Genic
-803
NZ_LR595896.1
432929
432941
ACCGCG
12
+
2
CGCGAC
UKMR15_RS01985
432699
433235
-
Genic
-230
NZ_LR595896.1
433144
433156
ACGGCG
12
+
2
CGGCGA
UKMR15_RS01985
432699
433235
-
Genic
-445
NZ_LR595896.1
433165
433177
ACGGCG
12
+
2
CGGCGA
UKMR15_RS01985
432699
433235
-
Genic
-466
NZ_LR595896.1
433218
433230
AGCGGG
12
+
2
GCGGGA
UKMR15_RS01985
432699
433235
-
Genic
-519
NZ_LR595896.1
435009
435022
ACGGGC
13
+
2
ACGGGC
UKMR15_RS01995
434805
435584
-
Genic
-204
NZ_LR595896.1
436214
436227
AGGCG
13
+
2
GCGAG
UKMR15_RS02000
436081
436545
+
Genic
-133
NZ_LR595896.1
436696
436713
ATCGGC
17
-
2
TGCCGA
UKMR15_RS02000
436081
436545
+
Intergenic
-615
NZ_LR595896.1
437216
437228
AGCGCG
12
+
2
GCGCGA
UKMR15_RS02000
436081
436545
+
Intergenic
-1135
NZ_LR595896.1
437382
437396
AGCGGC
14
+
2
GCAGCG
UKMR15_RS02000
436081
436545
+
Intergenic
-1301
NZ_LR595896.1
437418
437430
ACGGGC
12
+
2
GCACGG
UKMR15_RS02000
436081
436545
+
Intergenic
-1337