Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 726 to 750 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
463670
463684
AGCGGC
14
+
2
CGGCAG
UKMR15_RS02130
463110
463877
-
Genic
-560
NZ_LR595896.1
466719
466732
AAGGGC
13
+
2
CAAGGG
coxB
465689
467266
+
Genic
-1030
NZ_LR595896.1
468737
468749
AAGCCG
12
-
2
TTCGGC
ctaD
467310
468917
+
Genic
-1427
NZ_LR595896.1
468795
468807
CCG
12
-
4
GCG
ctaD
467310
468917
+
Genic
-1485
NZ_LR595896.1
469228
469244
AAGCCG
16
-
2
TTCGGC
UKMR15_RS02160
469148
469753
+
Genic
-80
NZ_LR595896.1
469471
469483
AGGGC
12
+
2
GGGCA
UKMR15_RS02160
469148
469753
+
Genic
-323
NZ_LR595896.1
469552
469564
AAGCAG
12
-
2
TGCTTC
UKMR15_RS02160
469148
469753
+
Genic
-404
NZ_LR595896.1
469685
469699
CCCGCG
14
+
2
CGCCCG
UKMR15_RS02160
469148
469753
+
Genic
-537
NZ_LR595896.1
470688
470700
AACAGG
12
-
2
TTCCTG
UKMR15_RS02175
471124
471333
-
Intergenic
424
NZ_LR595896.1
471183
471195
AACAGG
12
+
2
GAACAG
UKMR15_RS02175
471124
471333
-
Genic
-59
NZ_LR595896.1
472287
472304
AGCGCG
17
-
2
GCTCGC
UKMR15_RS02185
472199
472840
+
Genic
-88
NZ_LR595896.1
473300
473312
AGC
12
-
4
CTG
UKMR15_RS02190
472884
473993
+
Genic
-416
NZ_LR595896.1
473712
473724
AACGCG
12
-
2
CGTTCG
UKMR15_RS02190
472884
473993
+
Genic
-828
NZ_LR595896.1
473721
473733
ACG
12
-
4
TCG
UKMR15_RS02190
472884
473993
+
Genic
-837
NZ_LR595896.1
473865
473878
ACGGCG
13
-
2
CCGTCG
UKMR15_RS02190
472884
473993
+
Genic
-981
NZ_LR595896.1
477313
477327
AGCGC
14
+
2
GCGCA
UKMR15_RS02210
476105
477745
+
Genic
-1208
NZ_LR595896.1
477573
477585
CCG
12
-
4
GGC
UKMR15_RS02210
476105
477745
+
Genic
-1468
NZ_LR595896.1
477953
477966
AAACGG
13
-
2
TTTCCG
UKMR15_RS02215
477896
478714
+
Genic
-57
NZ_LR595896.1
478329
478343
AGC
14
-
4
GCT
UKMR15_RS02215
477896
478714
+
Genic
-433
NZ_LR595896.1
478428
478440
AAGCTG
12
+
2
GAAGCT
UKMR15_RS02215
477896
478714
+
Genic
-532
NZ_LR595896.1
478771
478783
AAAACG
12
-
2
TTTTCG
UKMR15_RS02215
477896
478714
+
Intergenic
-875
NZ_LR595896.1
479030
479043
CCGGCG
13
+
2
GGCGCC
UKMR15_RS02220
478965
479936
+
Genic
-65
NZ_LR595896.1
479041
479053
ACGCGC
12
+
2
CGCGCA
UKMR15_RS02220
478965
479936
+
Genic
-76
NZ_LR595896.1
479244
479256
ATCGCG
12
+
2
TCGCGA
UKMR15_RS02220
478965
479936
+
Genic
-279
NZ_LR595896.1
479549
479561
CCGCG
12
+
2
GCCGC
UKMR15_RS02220
478965
479936
+
Genic
-584