Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 776 to 800 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
493653
493666
AGCGGC
13
+
2
AGCGGC
UKMR15_RS02275
493290
494381
-
Genic
-363
NZ_LR595896.1
494081
494093
ACGCGC
12
+
2
CACGCG
UKMR15_RS02275
493290
494381
-
Genic
-791
NZ_LR595896.1
494521
494533
CCCGCG
12
-
2
GGCGCG
UKMR15_RS02280
494374
495417
-
Genic
-147
NZ_LR595896.1
494873
494888
AGCGGC
15
-
2
GCCGCT
UKMR15_RS02280
494374
495417
-
Genic
-499
NZ_LR595896.1
496374
496386
AGCGGC
12
+
2
AGCGGC
UKMR15_RS02285
495423
496490
-
Genic
-951
NZ_LR595896.1
496429
496441
AGGCGC
12
-
2
GCGCCT
UKMR15_RS02285
495423
496490
-
Genic
-1006
NZ_LR595896.1
496841
496853
AGCGCG
12
+
2
AGCGCG
UKMR15_RS02290
496487
497152
-
Genic
-354
NZ_LR595896.1
497259
497272
CCG
13
-
4
GGC
UKMR15_RS02295
497192
498343
-
Genic
-67
NZ_LR595896.1
497401
497414
AAGCGC
13
-
2
CTTGCG
UKMR15_RS02295
497192
498343
-
Genic
-209
NZ_LR595896.1
497709
497721
ACAGCG
12
+
2
GCGACA
UKMR15_RS02295
497192
498343
-
Genic
-517
NZ_LR595896.1
498072
498086
CCGCGG
14
+
2
CGGCCG
UKMR15_RS02295
497192
498343
-
Genic
-880
NZ_LR595896.1
498684
498696
CCGCG
12
+
2
GCCGC
UKMR15_RS02300
498345
500216
-
Genic
-339
NZ_LR595896.1
499181
499193
CCGCG
12
-
2
GCGCG
UKMR15_RS02300
498345
500216
-
Genic
-836
NZ_LR595896.1
500278
500290
CCCGCG
12
+
2
CGCGCC
UKMR15_RS02305
500213
501253
-
Genic
-65
NZ_LR595896.1
500347
500362
AGGCGC
15
-
2
CGCCTG
UKMR15_RS02305
500213
501253
-
Genic
-134
NZ_LR595896.1
500706
500718
ACGGCG
12
-
2
CGCCGT
UKMR15_RS02305
500213
501253
-
Genic
-493
NZ_LR595896.1
500970
500982
ACGCGC
12
+
2
ACGCGC
UKMR15_RS02305
500213
501253
-
Genic
-757
NZ_LR595896.1
502502
502514
CCGCG
12
-
2
GGCGC
UKMR15_RS02310
501271
502839
-
Genic
-1231
NZ_LR595896.1
504703
504717
ACGCGC
14
-
2
CGTGCG
UKMR15_RS02320
504033
505031
-
Genic
-670
NZ_LR595896.1
504767
504779
ACGTGC
12
+
2
GTGCAC
UKMR15_RS02320
504033
505031
-
Genic
-734
NZ_LR595896.1
506046
506058
CCCG
12
-
3
GCGG
UKMR15_RS02330
506038
506604
-
Genic
-8
NZ_LR595896.1
506177
506189
AACGCG
12
+
2
ACGCGA
UKMR15_RS02330
506038
506604
-
Genic
-139
NZ_LR595896.1
506234
506247
ATCGGC
13
-
2
CGATGC
UKMR15_RS02330
506038
506604
-
Genic
-196
NZ_LR595896.1
506983
506995
AGCGCG
12
+
2
CGAGCG
UKMR15_RS02335
506601
507488
-
Genic
-382
NZ_LR595896.1
507059
507072
ACGTCG
13
+
2
GTCGAC
UKMR15_RS02335
506601
507488
-
Genic
-458