Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 701 to 725 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
438054
438066
AGCGGC
12
+
2
CGGCAG
UKMR15_RS02010
438493
440166
+
Intergenic
427
NZ_LR595896.1
440157
440169
AATTC
12
-
2
TTGAA
UKMR15_RS02010
438493
440166
+
Genic
-1664
NZ_LR595896.1
441604
441617
AAACGG
13
-
2
TTCCGT
UKMR15_RS02020
440791
441390
-
Intergenic
-813
NZ_LR595896.1
443956
443968
AAGGGG
12
-
2
CCTTCC
UKMR15_RS02030
443851
445029
-
Genic
-105
NZ_LR595896.1
447297
447309
AGGCGC
12
-
2
CCTGCG
UKMR15_RS02045
447212
447463
-
Genic
-85
NZ_LR595896.1
448127
448139
AATCCG
12
-
2
GATTCG
UKMR15_RS02050
447832
448170
+
Genic
-295
NZ_LR595896.1
450156
450170
AGCTCG
14
+
2
GCTCGA
gshA
450119
451408
+
Genic
-37
NZ_LR595896.1
451203
451215
AGCGCG
12
+
2
GCGCGA
gshA
450119
451408
+
Genic
-1084
NZ_LR595896.1
451568
451580
CCCGCG
12
-
2
CGGGCG
gshB
451436
452392
+
Genic
-132
NZ_LR595896.1
452952
452964
CCG
12
+
4
CGC
UKMR15_RS02070
452565
453038
+
Genic
-387
NZ_LR595896.1
454280
454292
ACGATC
12
-
2
GATCGT
ptsP
453580
455352
+
Genic
-700
NZ_LR595896.1
454473
454485
ACGCCG
12
-
2
GTCGGC
ptsP
453580
455352
+
Genic
-893
NZ_LR595896.1
454790
454802
ACGCGC
12
+
2
CGCGCA
ptsP
453580
455352
+
Genic
-1210
NZ_LR595896.1
455080
455093
AAGCG
13
+
2
GCGAA
ptsP
453580
455352
+
Genic
-1500
NZ_LR595896.1
455104
455116
ACACCG
12
-
2
CGGTGT
ptsP
453580
455352
+
Genic
-1524
NZ_LR595896.1
455470
455529
ACGCAG
59
+
9
CGCAGA
moeB
455610
456368
-
Intergenic
81
NZ_LR595896.1
457510
457522
ACCGTG
12
+
2
CGTGAC
UKMR15_RS02090
456473
458065
-
Genic
-1037
NZ_LR595896.1
457940
457952
AGCGGC
12
+
2
AGCGGC
UKMR15_RS02090
456473
458065
-
Genic
-1467
NZ_LR595896.1
460486
460498
CCGGCG
12
+
2
CGGCGC
UKMR15_RS02115
460470
461468
+
Genic
-16
NZ_LR595896.1
461052
461064
ATCGCG
12
+
2
TCGCGA
UKMR15_RS02115
460470
461468
+
Genic
-582
NZ_LR595896.1
461084
461096
AGGCCG
12
-
2
GGCCTC
UKMR15_RS02115
460470
461468
+
Genic
-614
NZ_LR595896.1
461671
461683
ACGCTC
12
+
2
ACGCTC
UKMR15_RS02120
461621
462154
+
Genic
-50
NZ_LR595896.1
461719
461732
CCG
13
-
4
GGC
UKMR15_RS02120
461621
462154
+
Genic
-98
NZ_LR595896.1
463044
463057
AATCG
13
-
2
GATTC
trmL
462574
463044
-
Genic
-470
NZ_LR595896.1
463590
463603
AGCGCG
13
+
2
GCGAGC
UKMR15_RS02130
463110
463877
-
Genic
-480