Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 6626 to 6650 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
532221
532233
AAGCG
12
+
2
AGCGA
UKMR15_RS19890
531807
532091
-
Intergenic
-414
NZ_LR595897.1
537388
537402
AAGCG
14
-
2
GCTTC
UKMR15_RS19945
537355
538815
+
Genic
-33
NZ_LR595897.1
538579
538591
ACGTCG
12
+
2
ACGTCG
UKMR15_RS19945
537355
538815
+
Genic
-1224
NZ_LR595897.1
542321
542333
ACACCG
12
+
2
ACACCG
UKMR15_RS19970
542489
543223
-
Intergenic
156
NZ_LR595897.1
544968
544980
ACGCTC
12
-
2
GAGCGT
UKMR15_RS19975
543214
555579
-
Genic
-1754
NZ_LR595897.1
545988
546000
ACGTCC
12
+
2
CACGTC
UKMR15_RS19975
543214
555579
-
Genic
-2774
NZ_LR595897.1
546668
546680
ACAGCG
12
+
2
GCGACA
UKMR15_RS19975
543214
555579
-
Genic
-3454
NZ_LR595897.1
547094
547106
AACGG
12
-
2
GTTCC
UKMR15_RS19975
543214
555579
-
Genic
-3880
NZ_LR595897.1
547460
547472
AGCGCG
12
+
2
GCGCGA
UKMR15_RS19975
543214
555579
-
Genic
-4246
NZ_LR595897.1
548581
548593
ACGCG
12
-
2
CGCGT
UKMR15_RS19975
543214
555579
-
Genic
-5367
NZ_LR595897.1
550794
550811
AACGAG
17
+
2
CGAGAA
UKMR15_RS19975
543214
555579
-
Genic
-7580
NZ_LR595897.1
550876
550889
ACGATC
13
-
2
GTGATC
UKMR15_RS19975
543214
555579
-
Genic
-7662
NZ_LR595897.1
551178
551190
AAGCCG
12
+
2
GCCGAA
UKMR15_RS19975
543214
555579
-
Genic
-7964
NZ_LR595897.1
551664
551676
AACGCG
12
-
2
CGCGTT
UKMR15_RS19975
543214
555579
-
Genic
-8450
NZ_LR595897.1
551892
551905
AACGGC
13
-
2
GTTGCC
UKMR15_RS19975
543214
555579
-
Genic
-8678
NZ_LR595897.1
551908
551921
CCCGCG
13
-
2
GGCGCG
UKMR15_RS19975
543214
555579
-
Genic
-8694
NZ_LR595897.1
554069
554082
AGCGCG
13
+
2
GCGCGA
UKMR15_RS19975
543214
555579
-
Genic
-10855
NZ_LR595897.1
555134
555146
AAGCTG
12
+
2
GCTGAA
UKMR15_RS19975
543214
555579
-
Genic
-11920
NZ_LR595897.1
557599
557612
ACGGCC
13
-
2
CGTGGC
UKMR15_RS19980
555593
559156
-
Genic
-2006
NZ_LR595897.1
558137
558149
AGATC
12
+
2
CAGAT
UKMR15_RS19980
555593
559156
-
Genic
-2544
NZ_LR595897.1
558547
558559
AACTGG
12
+
2
CTGGAA
UKMR15_RS19980
555593
559156
-
Genic
-2954
NZ_LR595897.1
558623
558635
CCGCG
12
+
2
CGCGC
UKMR15_RS19980
555593
559156
-
Genic
-3030
NZ_LR595897.1
559178
559190
AAATAG
12
-
2
TCTATT
UKMR15_RS19980
555593
559156
-
Intergenic
-3585
NZ_LR595897.1
562541
562553
ACGATC
12
-
2
TGATCG
UKMR15_RS20000
561704
563416
+
Genic
-837
NZ_LR595897.1
563222
563234
AGCGCG
12
-
2
TCGCGC
UKMR15_RS20000
561704
563416
+
Genic
-1518