Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 6676 to 6700 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
587940
587953
CCCGCG
13
+
2
CCGCGC
UKMR15_RS20100
587982
588662
+
Intergenic
29
NZ_LR595897.1
588346
588361
ATCGCC
15
-
2
GATGGC
UKMR15_RS20100
587982
588662
+
Genic
-364
NZ_LR595897.1
588885
588899
ACGTCG
14
+
2
CGTCGA
UKMR15_RS20105
588692
589741
-
Genic
-193
NZ_LR595897.1
589519
589531
AGCGGC
12
+
2
CGGCAG
UKMR15_RS20105
588692
589741
-
Genic
-827
NZ_LR595897.1
590207
590221
AAGCCG
14
-
2
CGGCTT
UKMR15_RS20110
590080
591006
+
Genic
-127
NZ_LR595897.1
591068
591080
CG
12
+
6
GC
UKMR15_RS20115
591065
591967
-
Genic
-3
NZ_LR595897.1
591134
591146
AGAGCC
12
-
2
TGGCTC
UKMR15_RS20115
591065
591967
-
Genic
-69
NZ_LR595897.1
591500
591518
AGCGCG
18
+
3
AGCGCG
UKMR15_RS20115
591065
591967
-
Genic
-435
NZ_LR595897.1
592942
592954
AGCATC
12
+
2
TCAGCA
UKMR15_RS20120
592317
593519
-
Genic
-625
NZ_LR595897.1
593712
593724
ACGCGC
12
+
2
GCACGC
UKMR15_RS20125
593516
593818
-
Genic
-196
NZ_LR595897.1
595606
595618
AATCCG
12
-
2
GATTCG
UKMR15_RS20135
595111
595797
-
Genic
-495
NZ_LR595897.1
595845
595859
AGGCG
14
+
2
GCGAG
UKMR15_RS20135
595111
595797
-
Intergenic
-734
NZ_LR595897.1
596081
596093
ACCCGC
12
-
2
GTGCGG
UKMR15_RS20140
596329
596643
+
Intergenic
236
NZ_LR595897.1
596926
596938
ATCGCC
12
-
2
GCGATG
UKMR15_RS20145
596636
598534
+
Genic
-290
NZ_LR595897.1
597954
597966
ACGCG
12
+
2
CGACG
UKMR15_RS20145
596636
598534
+
Genic
-1318
NZ_LR595897.1
597964
597976
ACGCG
12
-
2
CGCGT
UKMR15_RS20145
596636
598534
+
Genic
-1328
NZ_LR595897.1
598406
598420
ACGCGC
14
-
2
CGTGCG
UKMR15_RS20145
596636
598534
+
Genic
-1770
NZ_LR595897.1
598545
598559
CCGCG
14
-
2
GCGCG
UKMR15_RS20145
596636
598534
+
Intergenic
-1909
NZ_LR595897.1
598934
598946
AGCCGG
12
-
2
CCGGCT
UKMR15_RS20150
599097
599987
+
Intergenic
151
NZ_LR595897.1
599151
599163
CCCGCG
12
+
2
CCGCGC
UKMR15_RS20150
599097
599987
+
Genic
-54
NZ_LR595897.1
599312
599325
ACGCCG
13
+
2
ACGCCG
UKMR15_RS20150
599097
599987
+
Genic
-215
NZ_LR595897.1
599807
599819
ACCCGT
12
+
2
CCGTAC
UKMR15_RS20150
599097
599987
+
Genic
-710
NZ_LR595897.1
599870
599882
AAGGCG
12
+
2
AAGGCG
UKMR15_RS20150
599097
599987
+
Genic
-773
NZ_LR595897.1
599990
600002
CCGCG
12
+
2
CGCGC
UKMR15_RS20155
599984
601669
+
Genic
-6
NZ_LR595897.1
600091
600103
CCG
12
-
4
GCG
UKMR15_RS20155
599984
601669
+
Genic
-107