Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 7201 to 7225 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
932466
932479
ACCGTC
13
+
2
CCGTCA
UKMR15_RS21510
932300
933142
-
Genic
-166
NZ_LR595897.1
932747
932759
CG
12
+
6
CG
UKMR15_RS21510
932300
933142
-
Genic
-447
NZ_LR595897.1
933242
933254
CCGCG
12
+
2
CGCGC
UKMR15_RS21515
933266
934384
+
Intergenic
12
NZ_LR595897.1
934175
934187
AGCGCG
12
+
2
GCGCGA
UKMR15_RS21515
933266
934384
+
Genic
-909
NZ_LR595897.1
936147
936159
AGCCGC
12
+
2
CGCAGC
UKMR15_RS21525
936060
937127
-
Genic
-87
NZ_LR595897.1
936509
936522
ATCGCC
13
+
2
CATCGC
UKMR15_RS21525
936060
937127
-
Genic
-449
NZ_LR595897.1
936736
936749
AGGCCG
13
+
2
GGCCGA
UKMR15_RS21525
936060
937127
-
Genic
-676
NZ_LR595897.1
937379
937391
CG
12
+
6
CG
UKMR15_RS21530
937120
938886
-
Genic
-259
NZ_LR595897.1
938345
938357
ACGATC
12
-
2
TGATCG
UKMR15_RS21530
937120
938886
-
Genic
-1225
NZ_LR595897.1
939318
939330
AAGGCG
12
-
2
CTTCGC
UKMR15_RS21535
938986
940074
-
Genic
-332
NZ_LR595897.1
940415
940428
ACCGGC
13
-
2
CCGGTG
UKMR15_RS21540
940203
940874
+
Genic
-212
NZ_LR595897.1
940639
940651
AGCGCG
12
-
2
CGCGCT
UKMR15_RS21540
940203
940874
+
Genic
-436
NZ_LR595897.1
941052
941067
ACCTCG
15
-
2
CGAGGT
UKMR15_RS21545
940871
942376
+
Genic
-181
NZ_LR595897.1
941180
941194
CCCGCG
14
-
2
CGGGCG
UKMR15_RS21545
940871
942376
+
Genic
-309
NZ_LR595897.1
941679
941693
AGCGCG
14
+
2
CGAGCG
UKMR15_RS21545
940871
942376
+
Genic
-808
NZ_LR595897.1
941757
941771
ACAGCG
14
-
2
GCTGTC
UKMR15_RS21545
940871
942376
+
Genic
-886
NZ_LR595897.1
942324
942338
CCCGCG
14
-
2
GCGCGG
UKMR15_RS21545
940871
942376
+
Genic
-1453
NZ_LR595897.1
942396
942409
AACGG
13
+
2
CGGAA
UKMR15_RS21545
940871
942376
+
Intergenic
-1525
NZ_LR595897.1
942810
942822
AACG
12
-
3
CGTT
UKMR15_RS21550
942990
943859
-
Intergenic
168
NZ_LR595897.1
943042
943054
ACGGCG
12
-
2
CGCCGT
UKMR15_RS21550
942990
943859
-
Genic
-52
NZ_LR595897.1
943228
943241
CCG
13
+
4
CGC
UKMR15_RS21550
942990
943859
-
Genic
-238
NZ_LR595897.1
943663
943675
AGCGCG
12
-
2
GCTCGC
UKMR15_RS21550
942990
943859
-
Genic
-673
NZ_LR595897.1
944221
944233
CCCG
12
-
3
GCGG
UKMR15_RS21555
944422
944646
+
Intergenic
189
NZ_LR595897.1
945290
945309
AGCCCG
19
+
3
CCGAGC
UKMR15_RS21560
945768
946970
+
Intergenic
459
NZ_LR595897.1
946517
946529
AGGCGC
12
+
2
GCGCAG
UKMR15_RS21560
945768
946970
+
Genic
-749