Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 7226 to 7250 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
946937
946952
ACGCCG
15
-
2
GGCGTC
UKMR15_RS21560
945768
946970
+
Genic
-1169
NZ_LR595897.1
947116
947205
AGGCCC
89
+
14
CAGGCC
UKMR15_RS21565
947066
947245
+
Genic
-50
NZ_LR595897.1
947207
947222
AAGGAG
15
+
2
AGAAGG
UKMR15_RS21565
947066
947245
+
Genic
-141
NZ_LR595897.1
947356
947368
ATGCCC
12
-
2
GCATGG
UKMR15_RS21565
947066
947245
+
Intergenic
-290
NZ_LR595897.1
947701
947713
ACCGAT
12
+
2
GATACC
UKMR15_RS21570
947734
948132
-
Intergenic
21
NZ_LR595897.1
947713
947726
AGCGCG
13
-
2
CGCTCG
UKMR15_RS21570
947734
948132
-
Intergenic
8
NZ_LR595897.1
948789
948802
ACGGGC
13
-
2
TGCCCG
UKMR15_RS21575
948495
949280
+
Genic
-294
NZ_LR595897.1
949145
949157
AGCGGC
12
+
2
CGGCAG
UKMR15_RS21575
948495
949280
+
Genic
-650
NZ_LR595897.1
949618
949630
CCGCGG
12
+
2
CGCGGC
alr
949580
950704
-
Genic
-38
NZ_LR595897.1
950499
950512
ACGCGC
13
+
2
CGCGCA
alr
949580
950704
-
Genic
-919
NZ_LR595897.1
950518
950530
ACCTCG
12
-
2
GTCGAG
alr
949580
950704
-
Genic
-938
NZ_LR595897.1
950742
950756
CCGCG
14
+
2
GCGCC
alr
949580
950704
-
Intergenic
-1162
NZ_LR595897.1
951168
951180
CCGCG
12
+
2
CGCCG
UKMR15_RS21590
951233
951613
+
Intergenic
53
NZ_LR595897.1
954052
954065
CCGCG
13
-
2
GGCGC
egtD
953018
953992
+
Intergenic
-1034
NZ_LR595897.1
954341
954356
AGCGCG
15
-
2
CGCTCG
UKMR15_RS21605
954211
954699
-
Genic
-130
NZ_LR595897.1
955372
955384
ACGAGG
12
-
2
CTCGTC
UKMR15_RS21610
954974
955795
-
Genic
-398
NZ_LR595897.1
955940
955952
ACAGCG
12
+
2
CAGCGA
UKMR15_RS21615
955809
957101
-
Genic
-131
NZ_LR595897.1
956153
956166
AGCGCG
13
+
2
CGCGAG
UKMR15_RS21615
955809
957101
-
Genic
-344
NZ_LR595897.1
956359
956372
ACGAGC
13
+
2
CGAGCA
UKMR15_RS21615
955809
957101
-
Genic
-550
NZ_LR595897.1
957278
957293
CCGCG
15
-
3
CGGCG
UKMR15_RS21615
955809
957101
-
Intergenic
-1469
NZ_LR595897.1
958517
958530
AGATGC
13
+
2
GCAGAT
UKMR15_RS21620
958237
958839
+
Genic
-280
NZ_LR595897.1
959087
959100
CCCGCG
13
-
2
CGGGCG
UKMR15_RS21620
958237
958839
+
Intergenic
-850
NZ_LR595897.1
959574
959586
ACGCG
12
+
2
CGACG
UKMR15_RS21625
959384
960064
+
Genic
-190
NZ_LR595897.1
961576
961588
ACCG
12
-
3
GTCG
UKMR15_RS21630
960344
961441
+
Intergenic
-1232
NZ_LR595897.1
961906
961918
ACGGCG
12
-
2
CGTCGC
UKMR15_RS21630
960344
961441
+
Intergenic
-1562