Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 7326 to 7350 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
1001878
1001891
CCGCG
13
+
2
CGCGC
UKMR15_RS21790
1000798
1002444
-
Genic
-1080
NZ_LR595897.1
1002338
1002350
CCGCG
12
-
2
GCGGC
UKMR15_RS21790
1000798
1002444
-
Genic
-1540
NZ_LR595897.1
1002755
1002767
CCG
12
-
4
CGG
UKMR15_RS21795
1002619
1002837
-
Genic
-136
NZ_LR595897.1
1002796
1002809
ACAGCG
13
+
2
GACAGC
UKMR15_RS21795
1002619
1002837
-
Genic
-177
NZ_LR595897.1
1004033
1004045
AGCGCG
12
+
2
CGAGCG
UKMR15_RS21800
1002964
1005201
-
Genic
-1069
NZ_LR595897.1
1004161
1004173
CG
12
+
6
GC
UKMR15_RS21800
1002964
1005201
-
Genic
-1197
NZ_LR595897.1
1004214
1004226
AAGGCG
12
+
2
AGGCGA
UKMR15_RS21800
1002964
1005201
-
Genic
-1250
NZ_LR595897.1
1004221
1004243
ACGGCG
22
+
3
GGCGAC
UKMR15_RS21800
1002964
1005201
-
Genic
-1257
NZ_LR595897.1
1004891
1004904
AGCGCG
13
+
2
CGAGCG
UKMR15_RS21800
1002964
1005201
-
Genic
-1927
NZ_LR595897.1
1005302
1005314
ACGCGC
12
+
2
CGCGCA
UKMR15_RS21805
1005412
1006422
+
Intergenic
98
NZ_LR595897.1
1005938
1005951
CCGCG
13
+
2
CGCCG
UKMR15_RS21805
1005412
1006422
+
Genic
-526
NZ_LR595897.1
1006113
1006130
ATCGGC
17
+
2
GGCATC
UKMR15_RS21805
1005412
1006422
+
Genic
-701
NZ_LR595897.1
1008015
1008028
AACGAC
13
+
2
CGACAA
UKMR15_RS21820
1007576
1008730
+
Genic
-439
NZ_LR595897.1
1009085
1009097
ACGTGC
12
+
2
CGTGCA
UKMR15_RS21825
1008844
1009308
+
Genic
-241
NZ_LR595897.1
1010072
1010084
ACGCG
12
-
2
CGTCG
codB
1009858
1011120
+
Genic
-214
NZ_LR595897.1
1010267
1010279
AACCCG
12
-
2
GTTCGG
codB
1009858
1011120
+
Genic
-409
NZ_LR595897.1
1011806
1011818
AGC
12
-
4
TGC
UKMR15_RS21840
1011125
1012357
+
Genic
-681
NZ_LR595897.1
1013318
1013331
AACGGC
13
+
2
CGGCAA
codA
1012357
1013613
+
Genic
-961
NZ_LR595897.1
1013724
1013736
ACGGGC
12
-
2
CGTGCC
UKMR15_RS21850
1013687
1015024
-
Genic
-37
NZ_LR595897.1
1013733
1013746
AGCCGC
13
+
2
GCCGCA
UKMR15_RS21850
1013687
1015024
-
Genic
-46
NZ_LR595897.1
1015999
1016012
ACCTGC
13
-
2
GTGCAG
UKMR15_RS21855
1015220
1016152
-
Genic
-779
NZ_LR595897.1
1016613
1016625
AACTGG
12
+
2
GAACTG
UKMR15_RS21860
1016194
1016991
-
Genic
-419
NZ_LR595897.1
1017211
1017223
CCGGCG
12
+
2
GCGCCG
UKMR15_RS21865
1017106
1017822
-
Genic
-105
NZ_LR595897.1
1018015
1018028
ACGGGC
13
+
2
GGCACG
UKMR15_RS21870
1017872
1018177
-
Genic
-143
NZ_LR595897.1
1019021
1019034
AGCGCG
13
-
2
GCGCTC
UKMR15_RS21875
1018176
1019522
+
Genic
-845