Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 7376 to 7400 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
1031957
1031985
AACGAC
28
-
4
TTGTCG
UKMR15_RS21930
1031940
1032182
+
Genic
-17
NZ_LR595897.1
1031985
1032006
ATCGGC
21
-
3
TGCCGA
UKMR15_RS21930
1031940
1032182
+
Genic
-45
NZ_LR595897.1
1032003
1032023
ACTGCT
20
+
3
TGCTAC
UKMR15_RS21930
1031940
1032182
+
Genic
-63
NZ_LR595897.1
1032036
1032063
ACCAGC
27
-
4
TGCTGG
UKMR15_RS21930
1031940
1032182
+
Genic
-96
NZ_LR595897.1
1032064
1032078
AGCCC
14
-
2
GGGCT
UKMR15_RS21930
1031940
1032182
+
Genic
-124
NZ_LR595897.1
1032922
1032934
ACGCCG
12
-
2
GCGTCG
UKMR15_RS21940
1032823
1033263
-
Genic
-99
NZ_LR595897.1
1033830
1033842
CCGCGG
12
+
2
CGCGGC
UKMR15_RS21945
1034218
1034302
-
Intergenic
376
NZ_LR595897.1
1034835
1034847
CCG
12
+
4
CGC
UKMR15_RS21950
1035055
1035882
+
Intergenic
208
NZ_LR595897.1
1035230
1035244
AGGGCG
14
+
2
GGGCGA
UKMR15_RS21950
1035055
1035882
+
Genic
-175
NZ_LR595897.1
1035339
1035352
ACTGCC
13
-
2
TGGCAG
UKMR15_RS21950
1035055
1035882
+
Genic
-284
NZ_LR595897.1
1035968
1035980
CCGCG
12
-
2
GCGCG
UKMR15_RS21955
1036049
1037497
+
Intergenic
69
NZ_LR595897.1
1036167
1036179
ACGCCG
12
+
2
CGCCGA
UKMR15_RS21955
1036049
1037497
+
Genic
-118
NZ_LR595897.1
1036441
1036453
AGCGCG
12
-
2
CTCGCG
UKMR15_RS21955
1036049
1037497
+
Genic
-392
NZ_LR595897.1
1037564
1037578
CCGCG
14
-
2
GCGCG
UKMR15_RS21960
1037554
1039371
+
Genic
-10
NZ_LR595897.1
1037587
1037601
ACGGCG
14
+
2
GCGACG
UKMR15_RS21960
1037554
1039371
+
Genic
-33
NZ_LR595897.1
1038012
1038024
CCGCGG
12
+
2
GCCGCG
UKMR15_RS21960
1037554
1039371
+
Genic
-458
NZ_LR595897.1
1039411
1039430
AGCCC
19
-
3
GGGCT
UKMR15_RS21960
1037554
1039371
+
Intergenic
-1857
NZ_LR595897.1
1040524
1040537
AGCGCG
13
-
2
TCGCGC
mhpT
1039633
1040838
+
Genic
-891
NZ_LR595897.1
1042118
1042130
ATCGGC
12
-
2
GCCGAT
UKMR15_RS21975
1042618
1044342
+
Intergenic
488
NZ_LR595897.1
1043027
1043039
CCG
12
-
4
CGG
UKMR15_RS21975
1042618
1044342
+
Genic
-409
NZ_LR595897.1
1043387
1043402
ACCGCG
15
+
2
CGCGAC
UKMR15_RS21975
1042618
1044342
+
Genic
-769
NZ_LR595897.1
1043398
1043410
CCG
12
+
4
CCG
UKMR15_RS21975
1042618
1044342
+
Genic
-780
NZ_LR595897.1
1043757
1043769
CCG
12
-
4
GCG
UKMR15_RS21975
1042618
1044342
+
Genic
-1139
NZ_LR595897.1
1043767
1043781
AACGTG
14
-
2
CGTTCA
UKMR15_RS21975
1042618
1044342
+
Genic
-1149
NZ_LR595897.1
1047599
1047611
CCCGCG
12
-
2
GCGCGG
UKMR15_RS21990
1046630
1048186
+
Genic
-969