Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 7401 to 7425 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
1047936
1047948
ACGAGC
12
-
2
CGTGCT
UKMR15_RS21990
1046630
1048186
+
Genic
-1306
NZ_LR595897.1
1048016
1048028
CCG
12
-
4
GCG
UKMR15_RS21990
1046630
1048186
+
Genic
-1386
NZ_LR595897.1
1048369
1048383
AGCGCG
14
-
2
CGCGCT
UKMR15_RS21995
1048176
1049201
+
Genic
-193
NZ_LR595897.1
1049223
1049235
AGC
12
-
4
GCT
UKMR15_RS22000
1049198
1049518
+
Genic
-25
NZ_LR595897.1
1050060
1050072
ACGCCC
12
-
2
TGGGCG
UKMR15_RS22005
1049553
1050875
+
Genic
-507
NZ_LR595897.1
1050231
1050243
CCGCG
12
+
2
GCCGC
UKMR15_RS22005
1049553
1050875
+
Genic
-678
NZ_LR595897.1
1050657
1050669
ACGTCC
12
-
2
TGGACG
UKMR15_RS22005
1049553
1050875
+
Genic
-1104
NZ_LR595897.1
1050932
1050944
CCGCG
12
-
2
CGGCG
UKMR15_RS22005
1049553
1050875
+
Intergenic
-1379
NZ_LR595897.1
1050956
1050971
CCCGCG
15
-
2
GCGCGG
UKMR15_RS22005
1049553
1050875
+
Intergenic
-1403
NZ_LR595897.1
1051897
1051909
CG
12
+
6
GC
UKMR15_RS22010
1051147
1051986
+
Genic
-750
NZ_LR595897.1
1052692
1052705
CG
13
+
6
GC
UKMR15_RS22015
1052126
1052869
+
Genic
-566
NZ_LR595897.1
1052898
1052911
CCGCG
13
+
2
GCCGC
UKMR15_RS22015
1052126
1052869
+
Intergenic
-772
NZ_LR595897.1
1053453
1053465
AAGGGC
12
+
2
CAAGGG
UKMR15_RS22020
1052945
1053787
+
Genic
-508
NZ_LR595897.1
1053545
1053557
ACGTCG
12
+
2
TCGACG
UKMR15_RS22020
1052945
1053787
+
Genic
-600
NZ_LR595897.1
1053759
1053772
AGCGGC
13
+
2
GCAGCG
UKMR15_RS22020
1052945
1053787
+
Genic
-814
NZ_LR595897.1
1053939
1053952
AACCTG
13
+
2
TGAACC
UKMR15_RS22025
1053939
1054715
+
Genic
0
NZ_LR595897.1
1055274
1055287
CCGCG
13
+
2
GCGCC
UKMR15_RS22030
1054751
1055089
+
Intergenic
-523
NZ_LR595897.1
1057353
1057365
CCG
12
-
4
CGG
UKMR15_RS22035
1057058
1062040
+
Genic
-295
NZ_LR595897.1
1057486
1057498
AAGCCG
12
-
2
TTCGGC
UKMR15_RS22035
1057058
1062040
+
Genic
-428
NZ_LR595897.1
1058008
1058020
ACGGCG
12
+
2
GCGACG
UKMR15_RS22035
1057058
1062040
+
Genic
-950
NZ_LR595897.1
1058172
1058185
CCCGCG
13
-
2
GGGCGC
UKMR15_RS22035
1057058
1062040
+
Genic
-1114
NZ_LR595897.1
1058812
1058827
ACGTCG
15
+
2
ACGTCG
UKMR15_RS22035
1057058
1062040
+
Genic
-1754
NZ_LR595897.1
1059187
1059202
ACGTCG
15
+
2
ACGTCG
UKMR15_RS22035
1057058
1062040
+
Genic
-2129
NZ_LR595897.1
1060666
1060678
ACCGGC
12
+
2
ACCGGC
UKMR15_RS22035
1057058
1062040
+
Genic
-3608
NZ_LR595897.1
1063097
1063110
CCCCCG
13
+
2
CCGCCC
UKMR15_RS22040
1062933
1063274
-
Genic
-164