Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 7451 to 7475 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
1084284
1084296
ATGCGC
12
+
2
GCGCAT
UKMR15_RS22135
1083778
1085193
+
Genic
-506
NZ_LR595897.1
1084859
1084872
ACGATC
13
+
2
CACGAT
UKMR15_RS22135
1083778
1085193
+
Genic
-1081
NZ_LR595897.1
1086639
1086651
CCCG
12
-
3
GGCG
UKMR15_RS22145
1085565
1086176
+
Intergenic
-1074
NZ_LR595897.1
1087147
1087161
AAACGG
14
-
2
TTTCCG
UKMR15_RS22145
1085565
1086176
+
Intergenic
-1582
NZ_LR595897.1
1087164
1087202
AAGCGG
38
-
6
GCTTCC
UKMR15_RS22145
1085565
1086176
+
Intergenic
-1599
NZ_LR595897.1
1087381
1087393
ACGAGC
12
+
2
ACGAGC
UKMR15_RS22145
1085565
1086176
+
Intergenic
-1816
NZ_LR595897.1
1087818
1087830
CCCGCG
12
+
2
CGCGCC
UKMR15_RS22155
1088986
1095138
-
Intergenic
1156
NZ_LR595897.1
1088850
1088862
AACCG
12
+
2
ACCGA
UKMR15_RS22155
1088986
1095138
-
Intergenic
124
NZ_LR595897.1
1089443
1089455
ACCGGC
12
+
2
GCACCG
UKMR15_RS22155
1088986
1095138
-
Genic
-457
NZ_LR595897.1
1089651
1089663
ACGCCG
12
+
2
CGCCGA
UKMR15_RS22155
1088986
1095138
-
Genic
-665
NZ_LR595897.1
1090388
1090400
ACGAGC
12
+
2
CGAGCA
UKMR15_RS22155
1088986
1095138
-
Genic
-1402
NZ_LR595897.1
1090775
1090792
AGCGCG
17
+
2
GCGCGA
UKMR15_RS22155
1088986
1095138
-
Genic
-1789
NZ_LR595897.1
1091260
1091274
CCG
14
+
4
CCG
UKMR15_RS22155
1088986
1095138
-
Genic
-2274
NZ_LR595897.1
1091449
1091461
CCCGCG
12
-
2
GCGGGC
UKMR15_RS22155
1088986
1095138
-
Genic
-2463
NZ_LR595897.1
1092033
1092045
ACGGCG
12
-
2
GCCGTC
UKMR15_RS22155
1088986
1095138
-
Genic
-3047
NZ_LR595897.1
1093266
1093280
ACGGCG
14
-
2
GTCGCC
UKMR15_RS22155
1088986
1095138
-
Genic
-4280
NZ_LR595897.1
1093641
1093654
ACGCTG
13
-
2
CAGCGT
UKMR15_RS22155
1088986
1095138
-
Genic
-4655
NZ_LR595897.1
1093677
1093689
ACAGCG
12
+
2
CAGCGA
UKMR15_RS22155
1088986
1095138
-
Genic
-4691
NZ_LR595897.1
1094251
1094264
CCGCG
13
-
2
GCGGC
UKMR15_RS22155
1088986
1095138
-
Genic
-5265
NZ_LR595897.1
1095641
1095653
AAAAAC
12
+
2
AAAACA
UKMR15_RS22160
1095684
1096214
+
Intergenic
31
NZ_LR595897.1
1097583
1097595
CG
12
+
6
GC
UKMR15_RS22170
1097361
1097831
+
Genic
-222
NZ_LR595897.1
1098197
1098212
AGCCCG
15
-
2
GGCTCG
UKMR15_RS22175
1097828
1100032
+
Genic
-369
NZ_LR595897.1
1098545
1098560
AAGCGC
15
-
2
TGCGCT
UKMR15_RS22175
1097828
1100032
+
Genic
-717
NZ_LR595897.1
1098657
1098669
CCG
12
+
4
CGC
UKMR15_RS22175
1097828
1100032
+
Genic
-829
NZ_LR595897.1
1100513
1100525
ATCCCG
12
+
2
CGATCC
UKMR15_RS22180
1100029
1100949
+
Genic
-484