Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 7476 to 7500 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
1100904
1100919
ACGCCG
15
-
2
GGCGTC
UKMR15_RS22180
1100029
1100949
+
Genic
-875
NZ_LR595897.1
1102028
1102040
ACGAGC
12
-
2
TGCTCG
UKMR15_RS22190
1101851
1103464
+
Genic
-177
NZ_LR595897.1
1102309
1102321
CCGCGG
12
+
2
CGCGGC
UKMR15_RS22190
1101851
1103464
+
Genic
-458
NZ_LR595897.1
1102751
1102763
ACGCG
12
+
2
GCGAC
UKMR15_RS22190
1101851
1103464
+
Genic
-900
NZ_LR595897.1
1102912
1102925
ACCGCC
13
-
2
GTGGCG
UKMR15_RS22190
1101851
1103464
+
Genic
-1061
NZ_LR595897.1
1103707
1103720
ACCAGC
13
-
2
GGTGCT
UKMR15_RS22195
1103457
1104350
+
Genic
-250
NZ_LR595897.1
1105552
1105565
CG
13
+
6
GC
UKMR15_RS22205
1105033
1106190
+
Genic
-519
NZ_LR595897.1
1108030
1108042
ACGCG
12
+
2
GCGAC
UKMR15_RS22215
1107166
1109109
+
Genic
-864
NZ_LR595897.1
1109700
1109712
ACTCTG
12
-
2
TCAGAG
UKMR15_RS22220
1109399
1109722
-
Genic
-301
NZ_LR595897.1
1109840
1109852
AGCGCG
12
+
2
GCGCGA
UKMR15_RS22220
1109399
1109722
-
Intergenic
-441
NZ_LR595897.1
1109907
1109919
CCCGCG
12
-
2
GCGCGG
UKMR15_RS22220
1109399
1109722
-
Intergenic
-508
NZ_LR595897.1
1109969
1109983
AGGCGG
14
+
2
GGCGGA
UKMR15_RS22220
1109399
1109722
-
Intergenic
-570
NZ_LR595897.1
1110383
1110395
CCGCG
12
+
2
CGCGC
UKMR15_RS22225
1110400
1111566
-
Intergenic
5
NZ_LR595897.1
1111189
1111202
AAGCGC
13
+
2
AAGCGC
UKMR15_RS22225
1110400
1111566
-
Genic
-789
NZ_LR595897.1
1111958
1111970
AATC
12
-
3
TTGA
UKMR15_RS22230
1111693
1111905
-
Intergenic
-265
NZ_LR595897.1
1112511
1112523
AACACG
12
+
2
CACGAA
UKMR15_RS22235
1112164
1112907
-
Genic
-347
NZ_LR595897.1
1112982
1112994
CCCGCG
12
-
2
GCGCGG
UKMR15_RS22235
1112164
1112907
-
Intergenic
-818
NZ_LR595897.1
1112987
1113001
CCGCG
14
-
2
GGCGC
UKMR15_RS22235
1112164
1112907
-
Intergenic
-823
NZ_LR595897.1
1113519
1113532
CCCCCG
13
-
2
GGGGGC
UKMR15_RS22240
1113279
1113467
+
Intergenic
-240
NZ_LR595897.1
1115028
1115041
CCGCG
13
+
2
CGCCG
UKMR15_RS22255
1114770
1115006
+
Intergenic
-258
NZ_LR595897.1
1115152
1115164
AGATGC
12
-
2
GCATCT
UKMR15_RS22260
1115085
1115732
-
Genic
-67
NZ_LR595897.1
1115572
1115585
ACGAGC
13
+
2
CGAGCA
UKMR15_RS22260
1115085
1115732
-
Genic
-487
NZ_LR595897.1
1115872
1115884
AGGCGC
12
+
2
GGCGCA
UKMR15_RS22260
1115085
1115732
-
Intergenic
-787
NZ_LR595897.1
1117127
1117139
CCG
12
+
4
CGC
UKMR15_RS22270
1117145
1117981
-
Intergenic
6
NZ_LR595897.1
1117158
1117170
ACCGGC
12
+
2
GCACCG
UKMR15_RS22270
1117145
1117981
-
Genic
-13