Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 7526 to 7550 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
1125363
1125376
CCGCG
13
+
2
GCGCC
UKMR15_RS22305
1124917
1125786
+
Genic
-446
NZ_LR595897.1
1125717
1125731
CCGCG
14
+
2
GCCGC
UKMR15_RS22305
1124917
1125786
+
Genic
-800
NZ_LR595897.1
1125911
1125956
ATCCGC
45
-
7
TGCGGA
UKMR15_RS22305
1124917
1125786
+
Intergenic
-994
NZ_LR595897.1
1125953
1125976
ACCTGC
23
-
3
TGCAGG
UKMR15_RS22305
1124917
1125786
+
Intergenic
-1036
NZ_LR595897.1
1126267
1126279
ATGCGC
12
+
2
ATGCGC
UKMR15_RS22310
1126749
1128134
+
Intergenic
470
NZ_LR595897.1
1126376
1126388
CCCGCG
12
-
2
GCGCGG
UKMR15_RS22310
1126749
1128134
+
Intergenic
361
NZ_LR595897.1
1127188
1127201
AATTCG
13
+
2
CGAATT
UKMR15_RS22310
1126749
1128134
+
Genic
-439
NZ_LR595897.1
1128206
1128218
CCCGG
12
-
2
CGGGC
UKMR15_RS22310
1126749
1128134
+
Intergenic
-1457
NZ_LR595897.1
1129224
1129236
AGGCG
12
-
2
CGCCT
UKMR15_RS22320
1129080
1129370
+
Genic
-144
NZ_LR595897.1
1130192
1130204
ACGCGC
12
-
2
CGTGCG
UKMR15_RS22325
1129764
1131080
-
Genic
-428
NZ_LR595897.1
1130348
1130360
ACCTCG
12
+
2
CTCGAC
UKMR15_RS22325
1129764
1131080
-
Genic
-584
NZ_LR595897.1
1131002
1131017
ACGCCG
15
-
2
GGCGTC
UKMR15_RS22325
1129764
1131080
-
Genic
-1238
NZ_LR595897.1
1131019
1131031
CCCCG
12
-
2
GGGGC
UKMR15_RS22325
1129764
1131080
-
Genic
-1255
NZ_LR595897.1
1131206
1131220
ACGCCG
14
-
2
GCGTCG
UKMR15_RS22325
1129764
1131080
-
Intergenic
-1442
NZ_LR595897.1
1131570
1131586
AGCGCG
16
+
2
GAGCGC
UKMR15_RS22330
1131502
1131999
-
Genic
-68
NZ_LR595897.1
1132535
1132547
ACAGCC
12
+
2
GCCACA
UKMR15_RS22335
1132117
1133001
-
Genic
-418
NZ_LR595897.1
1134002
1134016
CCCCG
14
-
2
GCGGG
UKMR15_RS22340
1133648
1133992
+
Intergenic
-354
NZ_LR595897.1
1135151
1135164
AACGGC
13
+
2
CGGCAA
UKMR15_RS22345
1134157
1135503
+
Genic
-994
NZ_LR595897.1
1135310
1135322
CCGGCG
12
+
2
CGGCGC
UKMR15_RS22345
1134157
1135503
+
Genic
-1153
NZ_LR595897.1
1135627
1135640
AGGCG
13
+
2
AGGCG
UKMR15_RS22345
1134157
1135503
+
Intergenic
-1470
NZ_LR595897.1
1136189
1136201
CCGCG
12
-
2
GCGCG
UKMR15_RS22350
1135999
1136970
+
Genic
-190
NZ_LR595897.1
1136911
1136923
ACGCCG
12
-
2
GCGTCG
UKMR15_RS22350
1135999
1136970
+
Genic
-912
NZ_LR595897.1
1138573
1138585
CCCGCG
12
-
2
CGGGCG
UKMR15_RS22365
1138221
1138712
+
Genic
-352
NZ_LR595897.1
1138783
1138795
CCG
12
-
4
GCG
UKMR15_RS22365
1138221
1138712
+
Intergenic
-562
NZ_LR595897.1
1139166
1139178
CCG
12
-
4
GCG
UKMR15_RS22370
1138930
1140624
+
Genic
-236