Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 7551 to 7575 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
1139421
1139433
AGCCGC
12
-
2
CGGCTG
UKMR15_RS22370
1138930
1140624
+
Genic
-491
NZ_LR595897.1
1139789
1139803
ACGCGC
14
-
2
GCGCGT
UKMR15_RS22370
1138930
1140624
+
Genic
-859
NZ_LR595897.1
1139829
1139843
AGCGCG
14
-
2
GCGCTC
UKMR15_RS22370
1138930
1140624
+
Genic
-899
NZ_LR595897.1
1139874
1139886
AGGCGC
12
+
2
GCGCAG
UKMR15_RS22370
1138930
1140624
+
Genic
-944
NZ_LR595897.1
1140193
1140208
CCGCG
15
+
3
CGCGC
UKMR15_RS22370
1138930
1140624
+
Genic
-1263
NZ_LR595897.1
1140673
1140685
AGATCG
12
-
2
CGATCT
UKMR15_RS22375
1140621
1142888
+
Genic
-52
NZ_LR595897.1
1141816
1141828
CCCGCG
12
+
2
CGCGCC
UKMR15_RS22375
1140621
1142888
+
Genic
-1195
NZ_LR595897.1
1141983
1141995
AGCGCG
12
-
2
CGCTCG
UKMR15_RS22375
1140621
1142888
+
Genic
-1362
NZ_LR595897.1
1142074
1142086
ACGCG
12
+
2
CGACG
UKMR15_RS22375
1140621
1142888
+
Genic
-1453
NZ_LR595897.1
1142098
1142112
CCGCG
14
+
2
CGCGC
UKMR15_RS22375
1140621
1142888
+
Genic
-1477
NZ_LR595897.1
1143400
1143412
CCGCG
12
-
2
GCGGC
UKMR15_RS22380
1142923
1144206
+
Genic
-477
NZ_LR595897.1
1143536
1143550
CCGCG
14
-
2
GCGCG
UKMR15_RS22380
1142923
1144206
+
Genic
-613
NZ_LR595897.1
1143646
1143659
ACGTCG
13
+
2
TCGACG
UKMR15_RS22380
1142923
1144206
+
Genic
-723
NZ_LR595897.1
1143681
1143693
ACGACT
12
+
2
TACGAC
UKMR15_RS22380
1142923
1144206
+
Genic
-758
NZ_LR595897.1
1143812
1143829
ACGCGC
17
+
2
CACGCG
UKMR15_RS22380
1142923
1144206
+
Genic
-889
NZ_LR595897.1
1145414
1145428
ACGCTC
14
+
2
CACGCT
fliD
1144981
1146504
+
Genic
-433
NZ_LR595897.1
1145451
1145463
ACATCG
12
+
2
ATCGAC
fliD
1144981
1146504
+
Genic
-470
NZ_LR595897.1
1146874
1146886
CCGCG
12
-
2
CGGCG
UKMR15_RS22400
1146901
1147800
-
Intergenic
15
NZ_LR595897.1
1148363
1148375
ACGCCG
12
+
2
CGACGC
UKMR15_RS22405
1147906
1148592
+
Genic
-457
NZ_LR595897.1
1150890
1150902
AGGCCG
12
+
2
GGCCGA
UKMR15_RS22425
1150433
1151374
+
Genic
-457
NZ_LR595897.1
1151325
1151337
ACGCGC
12
+
2
CGCGCA
UKMR15_RS22425
1150433
1151374
+
Genic
-892
NZ_LR595897.1
1151656
1151669
AGGCGG
13
+
2
AGGCGG
UKMR15_RS22430
1151371
1152204
+
Genic
-285
NZ_LR595897.1
1151825
1151837
CCCCCG
12
-
2
GGGGCG
UKMR15_RS22430
1151371
1152204
+
Genic
-454
NZ_LR595897.1
1152834
1152846
ACGGCG
12
+
2
CGACGG
UKMR15_RS22435
1152624
1153445
+
Genic
-210
NZ_LR595897.1
1153946
1153958
AGCGCG
12
+
2
CGAGCG
UKMR15_RS22440
1153702
1155204
+
Genic
-244