Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 7426 to 7450 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
1063644
1063656
ATCGGC
12
-
2
GCCGAT
UKMR15_RS22045
1063465
1064205
-
Genic
-179
NZ_LR595897.1
1063793
1063805
ACGCCG
12
+
2
CGCCGA
UKMR15_RS22045
1063465
1064205
-
Genic
-328
NZ_LR595897.1
1065365
1065377
AGCCCG
12
+
2
CGAGCC
UKMR15_RS22055
1064800
1066020
-
Genic
-565
NZ_LR595897.1
1066376
1066389
AATCG
13
+
2
AATCG
UKMR15_RS22055
1064800
1066020
-
Intergenic
-1576
NZ_LR595897.1
1067737
1067752
CCCGG
15
-
3
GGCCG
UKMR15_RS22065
1067626
1068063
+
Genic
-111
NZ_LR595897.1
1067912
1067925
AAGGCG
13
+
2
GGCGAA
UKMR15_RS22065
1067626
1068063
+
Genic
-286
NZ_LR595897.1
1068780
1068793
AAGGCG
13
+
2
GAAGGC
UKMR15_RS22070
1068212
1069354
+
Genic
-568
NZ_LR595897.1
1070960
1070973
ACACGG
13
-
2
CCGTGT
UKMR15_RS22080
1070521
1071045
-
Genic
-439
NZ_LR595897.1
1071066
1071078
ACCGC
12
-
2
CGGTG
UKMR15_RS22080
1070521
1071045
-
Intergenic
-545
NZ_LR595897.1
1072460
1072472
ATCGGC
12
-
2
CGATGC
UKMR15_RS22085
1071544
1073610
-
Genic
-916
NZ_LR595897.1
1072756
1072768
CCCGCG
12
+
2
CGCGCC
UKMR15_RS22085
1071544
1073610
-
Genic
-1212
NZ_LR595897.1
1073109
1073122
ATCGGC
13
-
2
GCCGAT
UKMR15_RS22085
1071544
1073610
-
Genic
-1565
NZ_LR595897.1
1073352
1073366
AGCGCG
14
+
2
CGCGAG
UKMR15_RS22085
1071544
1073610
-
Genic
-1808
NZ_LR595897.1
1073788
1073800
CCGCG
12
-
2
GCGCG
UKMR15_RS22090
1073937
1074404
-
Intergenic
137
NZ_LR595897.1
1075342
1075357
ATCGCC
15
-
2
GCGATG
UKMR15_RS22095
1074737
1076122
+
Genic
-605
NZ_LR595897.1
1076223
1076235
ACGCGC
12
+
2
CGCGCA
UKMR15_RS22100
1076154
1077356
+
Genic
-69
NZ_LR595897.1
1076302
1076315
AGGCCG
13
+
2
CGAGGC
UKMR15_RS22100
1076154
1077356
+
Genic
-148
NZ_LR595897.1
1077690
1077702
AGCATC
12
+
2
AGCATC
UKMR15_RS22105
1077688
1078077
+
Genic
-2
NZ_LR595897.1
1078463
1078475
CCCGCG
12
-
2
GCGCGG
UKMR15_RS22105
1077688
1078077
+
Intergenic
-775
NZ_LR595897.1
1079951
1079963
CCGCG
12
+
2
CGCGC
UKMR15_RS22115
1079973
1080623
-
Intergenic
10
NZ_LR595897.1
1081866
1081879
CG
13
+
6
CG
UKMR15_RS22120
1080745
1082058
-
Genic
-1121
NZ_LR595897.1
1083567
1083599
ACCGCT
32
+
5
GCTACC
UKMR15_RS22135
1083778
1085193
+
Intergenic
179
NZ_LR595897.1
1083598
1083637
AACCCC
39
+
6
CCAACC
UKMR15_RS22135
1083778
1085193
+
Intergenic
141
NZ_LR595897.1
1083668
1083680
CCGCG
12
+
2
CGCCG
UKMR15_RS22135
1083778
1085193
+
Intergenic
98
NZ_LR595897.1
1083760
1083773
AACCG
13
+
2
CCGAA
UKMR15_RS22135
1083778
1085193
+
Intergenic
5