Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 7626 to 7650 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
1189645
1189657
AGATCG
12
-
2
TCTCGA
UKMR15_RS22625
1188295
1189785
+
Genic
-1350
NZ_LR595897.1
1191003
1191015
ACGTCG
12
+
2
TCGACG
UKMR15_RS22635
1190793
1192007
+
Genic
-210
NZ_LR595897.1
1191191
1191204
AGCGCG
13
-
2
GCGCTC
UKMR15_RS22635
1190793
1192007
+
Genic
-398
NZ_LR595897.1
1191498
1191510
ACCGCG
12
-
2
TCGCGG
UKMR15_RS22635
1190793
1192007
+
Genic
-705
NZ_LR595897.1
1192228
1192240
AGCGGC
12
-
2
CGCTGC
UKMR15_RS22640
1192042
1193448
+
Genic
-186
NZ_LR595897.1
1193167
1193179
AGCGCG
12
-
2
CGCTCG
UKMR15_RS22640
1192042
1193448
+
Genic
-1125
NZ_LR595897.1
1194555
1194567
ATCGCG
12
+
2
CGATCG
UKMR15_RS22645
1194006
1196468
+
Genic
-549
NZ_LR595897.1
1194566
1194578
CCCGCG
12
-
2
GGCGCG
UKMR15_RS22645
1194006
1196468
+
Genic
-560
NZ_LR595897.1
1194735
1194750
ACCCGC
15
-
2
CGGGTG
UKMR15_RS22645
1194006
1196468
+
Genic
-729
NZ_LR595897.1
1194865
1194879
ATCGCG
14
+
2
CGCGAT
UKMR15_RS22645
1194006
1196468
+
Genic
-859
NZ_LR595897.1
1194979
1194992
ACGGGC
13
+
2
CACGGG
UKMR15_RS22645
1194006
1196468
+
Genic
-973
NZ_LR595897.1
1195554
1195566
AGCGCG
12
-
2
CGCTCG
UKMR15_RS22645
1194006
1196468
+
Genic
-1548
NZ_LR595897.1
1195958
1195971
AGCGGC
13
+
2
GGCAGC
UKMR15_RS22645
1194006
1196468
+
Genic
-1952
NZ_LR595897.1
1196147
1196159
AACGTG
12
+
2
GTGAAC
UKMR15_RS22645
1194006
1196468
+
Genic
-2141
NZ_LR595897.1
1197609
1197623
CCGCG
14
-
2
CGCGG
UKMR15_RS22655
1197518
1197952
-
Genic
-91
NZ_LR595897.1
1197621
1197633
ACG
12
+
4
CGA
UKMR15_RS22655
1197518
1197952
-
Genic
-103
NZ_LR595897.1
1197993
1198005
ACGCCG
12
-
2
CGTCGG
UKMR15_RS22655
1197518
1197952
-
Intergenic
-475
NZ_LR595897.1
1201831
1201843
AACGCG
12
-
2
CGTTCG
UKMR15_RS22670
1200805
1202106
+
Genic
-1026
NZ_LR595897.1
1203001
1203013
CCGCG
12
-
2
GCGGC
UKMR15_RS22680
1202935
1203636
+
Genic
-66
NZ_LR595897.1
1203337
1203349
CCCGCG
12
-
2
CGGGCG
UKMR15_RS22680
1202935
1203636
+
Genic
-402
NZ_LR595897.1
1203909
1203921
AATTCG
12
+
2
TCGAAT
UKMR15_RS22685
1203753
1204625
+
Genic
-156
NZ_LR595897.1
1205122
1205134
ACGGCG
12
+
2
CGGCGA
UKMR15_RS22690
1204911
1205468
+
Genic
-211
NZ_LR595897.1
1206781
1206793
CCCGCG
12
+
2
CCGCGC
UKMR15_RS22700
1206178
1207089
+
Genic
-603
NZ_LR595897.1
1209475
1209488
AGCGCG
13
-
2
GCTCGC
UKMR15_RS22715
1208934
1210352
+
Genic
-541
NZ_LR595897.1
1209730
1209742
ACCGC
12
-
2
CGGTG
UKMR15_RS22715
1208934
1210352
+
Genic
-796