Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 7676 to 7700 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
1229281
1229293
CCCGCG
12
+
2
CCGCGC
UKMR15_RS22790
1228840
1230168
+
Genic
-441
NZ_LR595897.1
1230001
1230013
ATCGCG
12
+
2
TCGCGA
UKMR15_RS22790
1228840
1230168
+
Genic
-1161
NZ_LR595897.1
1230229
1230241
CCCCG
12
-
2
GGCGG
UKMR15_RS22790
1228840
1230168
+
Intergenic
-1389
NZ_LR595897.1
1230525
1230537
CCCGCG
12
+
2
CCGCGC
UKMR15_RS22795
1230454
1231563
+
Genic
-71
NZ_LR595897.1
1230755
1230767
CG
12
+
6
CG
UKMR15_RS22795
1230454
1231563
+
Genic
-301
NZ_LR595897.1
1231798
1231811
CCGCG
13
+
2
GCGCC
UKMR15_RS22800
1231627
1232517
-
Genic
-171
NZ_LR595897.1
1231846
1231860
ACGGGC
14
+
2
ACGGGC
UKMR15_RS22800
1231627
1232517
-
Genic
-219
NZ_LR595897.1
1231979
1231993
ACGGGC
14
-
2
TGCCCG
UKMR15_RS22800
1231627
1232517
-
Genic
-352
NZ_LR595897.1
1232300
1232312
CCCCCG
12
-
2
GGCGGG
UKMR15_RS22800
1231627
1232517
-
Genic
-673
NZ_LR595897.1
1232911
1232923
AAGGC
12
+
2
GCAAG
UKMR15_RS22805
1232892
1233290
+
Genic
-19
NZ_LR595897.1
1234489
1234502
CCGCG
13
+
2
CGCCG
UKMR15_RS22810
1234122
1235075
+
Genic
-367
NZ_LR595897.1
1234516
1234528
ACCGGC
12
+
2
CGGCAC
UKMR15_RS22810
1234122
1235075
+
Genic
-394
NZ_LR595897.1
1234572
1234589
ACGCGC
17
-
2
GCGTGC
UKMR15_RS22810
1234122
1235075
+
Genic
-450
NZ_LR595897.1
1235229
1235242
AGCCGC
13
+
2
CCGCAG
UKMR15_RS22810
1234122
1235075
+
Intergenic
-1107
NZ_LR595897.1
1235590
1235603
ACGATC
13
+
2
ATCACG
UKMR15_RS22820
1235956
1237122
-
Intergenic
353
NZ_LR595897.1
1236966
1236978
AACACG
12
+
2
GAACAC
UKMR15_RS22820
1235956
1237122
-
Genic
-1010
NZ_LR595897.1
1237976
1237989
AACGAC
13
+
2
CGACAA
UKMR15_RS22830
1237543
1238697
+
Genic
-433
NZ_LR595897.1
1238643
1238655
ACGCCG
12
-
2
TCGGCG
UKMR15_RS22830
1237543
1238697
+
Genic
-1100
NZ_LR595897.1
1240922
1240934
CCGGCG
12
+
2
GCGCCG
UKMR15_RS22850
1240728
1241675
+
Genic
-194
NZ_LR595897.1
1241048
1241060
ATCGGC
12
+
2
ATCGGC
UKMR15_RS22850
1240728
1241675
+
Genic
-320
NZ_LR595897.1
1241120
1241132
CCCGCG
12
-
2
GGCGCG
UKMR15_RS22850
1240728
1241675
+
Genic
-392
NZ_LR595897.1
1242569
1242581
ACGGGC
12
+
2
ACGGGC
penI
1241850
1242737
+
Genic
-719
NZ_LR595897.1
1244539
1244551
CCGCG
12
+
2
GCGCC
UKMR15_RS22870
1244439
1244774
-
Genic
-100
NZ_LR595897.1
1244992
1245005
AGGGCG
13
+
2
GGCGAG
UKMR15_RS22870
1244439
1244774
-
Intergenic
-553
NZ_LR595897.1
1245006
1245019
AGCCG
13
-
2
GGCTC
UKMR15_RS22870
1244439
1244774
-
Intergenic
-567