Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 7701 to 7725 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
1245159
1245178
CCCCCG
19
-
3
GGGGCG
UKMR15_RS22870
1244439
1244774
-
Intergenic
-720
NZ_LR595897.1
1246031
1246045
ACGCGG
14
-
2
CGCGTC
UKMR15_RS22875
1245627
1246415
-
Genic
-404
NZ_LR595897.1
1247104
1247116
AGCCGG
12
+
2
GCCGGA
UKMR15_RS22880
1246391
1247272
-
Genic
-713
NZ_LR595897.1
1247720
1247733
AGCGCG
13
+
2
CGCGAG
UKMR15_RS22885
1247274
1248215
-
Genic
-446
NZ_LR595897.1
1249226
1249238
ACGCTC
12
-
2
GAGCGT
UKMR15_RS22890
1248258
1249328
-
Genic
-968
NZ_LR595897.1
1249879
1249894
AAGGCG
15
-
2
CGCCTT
UKMR15_RS22895
1249349
1250950
-
Genic
-530
NZ_LR595897.1
1250655
1250670
AACGTG
15
+
2
TGAACG
UKMR15_RS22895
1249349
1250950
-
Genic
-1306
NZ_LR595897.1
1251222
1251234
AGC
12
+
4
AGC
ddpX
1251099
1251668
-
Genic
-123
NZ_LR595897.1
1251495
1251510
ACCGCG
15
+
2
GCGACC
ddpX
1251099
1251668
-
Genic
-396
NZ_LR595897.1
1251606
1251618
ACGTCG
12
+
2
TCGACG
ddpX
1251099
1251668
-
Genic
-507
NZ_LR595897.1
1253064
1253076
CCGCG
12
+
2
CGCGC
UKMR15_RS22910
1253062
1253343
-
Genic
-2
NZ_LR595897.1
1253487
1253499
CCGCG
12
-
2
CGGCG
UKMR15_RS22915
1253569
1254717
-
Intergenic
70
NZ_LR595897.1
1254213
1254225
AGCAGG
12
+
2
GAGCAG
UKMR15_RS22915
1253569
1254717
-
Genic
-644
NZ_LR595897.1
1254257
1254269
AGCGCG
12
+
2
GCGCGA
UKMR15_RS22915
1253569
1254717
-
Genic
-688
NZ_LR595897.1
1256134
1256146
ATCCCG
12
-
2
GGATCG
tssI
1255070
1257055
+
Genic
-1064
NZ_LR595897.1
1257125
1257138
ACATCG
13
+
2
ACATCG
UKMR15_RS22925
1257147
1257587
+
Intergenic
9
NZ_LR595897.1
1259361
1259373
ATCGGC
12
+
2
GGCATC
UKMR15_RS22930
1257639
1262264
+
Genic
-1722
NZ_LR595897.1
1260778
1260793
CCGCG
15
-
3
GCGCG
UKMR15_RS22930
1257639
1262264
+
Genic
-3139
NZ_LR595897.1
1261256
1261270
CCGG
14
+
3
GCCG
UKMR15_RS22930
1257639
1262264
+
Genic
-3617
NZ_LR595897.1
1262914
1262926
CCGCG
12
-
2
CGGCG
UKMR15_RS22935
1262271
1262750
+
Intergenic
-643
NZ_LR595897.1
1263590
1263603
CCGCG
13
+
2
CGCCG
UKMR15_RS22940
1263201
1263425
+
Intergenic
-389
NZ_LR595897.1
1265718
1265731
AGCGGC
13
+
2
AGCGGC
UKMR15_RS22945
1263793
1267188
+
Genic
-1925
NZ_LR595897.1
1265916
1265929
AGCGCG
13
-
2
GCGCTC
UKMR15_RS22945
1263793
1267188
+
Genic
-2123
NZ_LR595897.1
1265935
1265947
CCG
12
+
4
CGC
UKMR15_RS22945
1263793
1267188
+
Genic
-2142
NZ_LR595897.1
1266485
1266497
CCCG
12
-
3
GCGG
UKMR15_RS22945
1263793
1267188
+
Genic
-2692