Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 7751 to 7775 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
1281756
1281768
ATCGCG
12
+
2
ATCGCG
mgtA
1280073
1282859
-
Genic
-1683
NZ_LR595897.1
1282041
1282053
ACCGCC
12
-
2
GCGGTG
mgtA
1280073
1282859
-
Genic
-1968
NZ_LR595897.1
1282567
1282579
ACGAGC
12
+
2
CGAGCA
mgtA
1280073
1282859
-
Genic
-2494
NZ_LR595897.1
1282786
1282799
ACGGCG
13
-
2
CGTCGC
mgtA
1280073
1282859
-
Genic
-2713
NZ_LR595897.1
1284251
1284265
ATCGGC
14
-
2
CGATGC
UKMR15_RS23005
1283599
1285224
-
Genic
-652
NZ_LR595897.1
1284416
1284428
ACGGCC
12
-
2
GGCCGT
UKMR15_RS23005
1283599
1285224
-
Genic
-817
NZ_LR595897.1
1285114
1285131
ACCGGC
17
-
2
GCCGGT
UKMR15_RS23005
1283599
1285224
-
Genic
-1515
NZ_LR595897.1
1286184
1286196
ACGGAT
12
+
2
TACGGA
UKMR15_RS23010
1286228
1286734
+
Intergenic
32
NZ_LR595897.1
1286612
1286624
AAACTG
12
+
2
CTGAAA
UKMR15_RS23010
1286228
1286734
+
Genic
-384
NZ_LR595897.1
1287321
1287333
ACG
12
-
4
CGT
UKMR15_RS23020
1287299
1288912
+
Genic
-22
NZ_LR595897.1
1287801
1287814
AGCGGC
13
-
2
GCCGCT
UKMR15_RS23020
1287299
1288912
+
Genic
-502
NZ_LR595897.1
1288167
1288180
AGCATC
13
-
2
GCTGAT
UKMR15_RS23020
1287299
1288912
+
Genic
-868
NZ_LR595897.1
1289704
1289716
AGCCGC
12
+
2
CGCAGC
UKMR15_RS23025
1288912
1290270
+
Genic
-792
NZ_LR595897.1
1290004
1290016
AAGGGC
12
+
2
AGGGCA
UKMR15_RS23025
1288912
1290270
+
Genic
-1092
NZ_LR595897.1
1290497
1290509
AGC
12
-
4
CTG
UKMR15_RS23025
1288912
1290270
+
Intergenic
-1585
NZ_LR595897.1
1290628
1290640
ACGGCG
12
-
2
CGTCGC
UKMR15_RS23035
1290927
1292042
+
Intergenic
287
NZ_LR595897.1
1290803
1290815
ATCGCG
12
+
2
ATCGCG
UKMR15_RS23035
1290927
1292042
+
Intergenic
112
NZ_LR595897.1
1291790
1291803
ACGCGC
13
-
2
GTGCGC
UKMR15_RS23035
1290927
1292042
+
Genic
-863
NZ_LR595897.1
1291961
1291974
ACGCG
13
+
2
CGCGA
UKMR15_RS23035
1290927
1292042
+
Genic
-1034
NZ_LR595897.1
1292202
1292214
CCGGCG
12
+
2
CGCCGG
UKMR15_RS23040
1292241
1293044
-
Intergenic
27
NZ_LR595897.1
1292214
1292227
CCGCGG
13
+
2
GCGGCC
UKMR15_RS23040
1292241
1293044
-
Intergenic
14
NZ_LR595897.1
1293478
1293490
CCCGCG
12
+
2
CCGCGC
hisQ
1293509
1294198
+
Intergenic
19
NZ_LR595897.1
1294078
1294090
AAG
12
-
4
TTC
hisQ
1293509
1294198
+
Genic
-569
NZ_LR595897.1
1294292
1294304
AGCCCG
12
-
2
GCTCGG
UKMR15_RS23050
1294195
1294908
+
Genic
-97
NZ_LR595897.1
1295192
1295204
CCGCG
12
-
2
CGGCG
UKMR15_RS23055
1294977
1295744
+
Genic
-215