Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 7801 to 7825 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
1316489
1316501
AGCCG
12
-
2
GCTCG
UKMR15_RS23155
1315731
1316990
-
Genic
-758
NZ_LR595897.1
1318031
1318043
ACGTCG
12
+
2
CGACGT
UKMR15_RS23165
1317887
1317960
+
Intergenic
-144
NZ_LR595897.1
1318063
1318076
CCGCG
13
-
2
GCGCG
UKMR15_RS23165
1317887
1317960
+
Intergenic
-176
NZ_LR595897.1
1320038
1320052
ATCCGC
14
-
2
GATGCG
fabD
1319846
1321153
-
Genic
-192
NZ_LR595897.1
1320061
1320073
CCGCG
12
-
2
GCGCG
fabD
1319846
1321153
-
Genic
-215
NZ_LR595897.1
1320707
1320719
AAGTCG
12
+
2
TCGAAG
fabD
1319846
1321153
-
Genic
-861
NZ_LR595897.1
1321414
1321428
CCGCG
14
+
2
GCGCC
UKMR15_RS23180
1321404
1322636
-
Genic
-10
NZ_LR595897.1
1321580
1321592
AGCCCG
12
+
2
CCCGAG
UKMR15_RS23180
1321404
1322636
-
Genic
-176
NZ_LR595897.1
1321702
1321714
ACGTCG
12
+
2
CGTCGA
UKMR15_RS23180
1321404
1322636
-
Genic
-298
NZ_LR595897.1
1322106
1322119
AGCGCG
13
+
2
GCGAGC
UKMR15_RS23180
1321404
1322636
-
Genic
-702
NZ_LR595897.1
1322201
1322214
ATCGGC
13
-
2
GATGCC
UKMR15_RS23180
1321404
1322636
-
Genic
-797
NZ_LR595897.1
1322966
1322978
CCGCG
12
+
2
CGCGC
UKMR15_RS23185
1323238
1336836
+
Intergenic
260
NZ_LR595897.1
1323194
1323206
ATCGCG
12
+
2
CGATCG
UKMR15_RS23185
1323238
1336836
+
Intergenic
32
NZ_LR595897.1
1323304
1323316
CCCGCG
12
-
2
GGGCGC
UKMR15_RS23185
1323238
1336836
+
Genic
-66
NZ_LR595897.1
1323607
1323619
ACGAGC
12
-
2
TCGTGC
UKMR15_RS23185
1323238
1336836
+
Genic
-369
NZ_LR595897.1
1324978
1324990
ATCCG
12
+
2
CCGAT
UKMR15_RS23185
1323238
1336836
+
Genic
-1740
NZ_LR595897.1
1326328
1326341
AGCATC
13
-
2
TGATGC
UKMR15_RS23185
1323238
1336836
+
Genic
-3090
NZ_LR595897.1
1326530
1326542
ACCGGC
12
+
2
CGGCAC
UKMR15_RS23185
1323238
1336836
+
Genic
-3292
NZ_LR595897.1
1327038
1327051
CCG
13
+
4
GCC
UKMR15_RS23185
1323238
1336836
+
Genic
-3800
NZ_LR595897.1
1327429
1327442
CCG
13
+
4
CCG
UKMR15_RS23185
1323238
1336836
+
Genic
-4191
NZ_LR595897.1
1327469
1327484
CCGCG
15
+
3
CCGCG
UKMR15_RS23185
1323238
1336836
+
Genic
-4231
NZ_LR595897.1
1327726
1327738
AGCCGC
12
-
2
TGCGGC
UKMR15_RS23185
1323238
1336836
+
Genic
-4488
NZ_LR595897.1
1327744
1327758
CCCGG
14
+
2
CGGCC
UKMR15_RS23185
1323238
1336836
+
Genic
-4506
NZ_LR595897.1
1329541
1329553
AGCGCG
12
-
2
TCGCGC
UKMR15_RS23185
1323238
1336836
+
Genic
-6303
NZ_LR595897.1
1329787
1329804
ACGGCG
17
-
2
CGTCGC
UKMR15_RS23185
1323238
1336836
+
Genic
-6549