Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 8151 to 8175 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
1487981
1487993
CCCGCG
12
+
2
CGCGCC
UKMR15_RS23690
1487994
1488512
-
Intergenic
1
NZ_LR595897.1
1489365
1489379
AGCGCG
14
-
2
CGCGCT
UKMR15_RS23695
1488512
1490236
-
Genic
-853
NZ_LR595897.1
1489391
1489403
AGCCGC
12
+
2
CGCAGC
UKMR15_RS23695
1488512
1490236
-
Genic
-879
NZ_LR595897.1
1489458
1489470
AACGCG
12
+
2
ACGCGA
UKMR15_RS23695
1488512
1490236
-
Genic
-946
NZ_LR595897.1
1490141
1490153
ACGCCG
12
-
2
GCGTCG
UKMR15_RS23695
1488512
1490236
-
Genic
-1629
NZ_LR595897.1
1490487
1490499
AGGATC
12
+
2
TCAGGA
UKMR15_RS23700
1490240
1491700
-
Genic
-247
NZ_LR595897.1
1491554
1491568
AGCGCG
14
+
2
GCGAGC
UKMR15_RS23700
1490240
1491700
-
Genic
-1314
NZ_LR595897.1
1491843
1491855
CCGCGG
12
+
2
GCCGCG
UKMR15_RS23705
1491693
1492352
-
Genic
-150
NZ_LR595897.1
1492295
1492307
AGC
12
+
4
CAG
UKMR15_RS23705
1491693
1492352
-
Genic
-602
NZ_LR595897.1
1492471
1492483
CCGCG
12
+
2
GCGCC
UKMR15_RS23710
1492353
1493303
-
Genic
-118
NZ_LR595897.1
1492969
1492981
AGCGCG
12
+
2
GCGCGA
UKMR15_RS23710
1492353
1493303
-
Genic
-616
NZ_LR595897.1
1494761
1494773
AGCGCG
12
+
2
AGCGCG
hyfB
1493297
1495303
-
Genic
-1464
NZ_LR595897.1
1494859
1494872
ACGCTG
13
-
2
CAGCGT
hyfB
1493297
1495303
-
Genic
-1562
NZ_LR595897.1
1495602
1495614
CCCGCG
12
+
2
CGCGCC
UKMR15_RS23720
1495661
1496434
+
Intergenic
47
NZ_LR595897.1
1496400
1496413
CCGG
13
+
3
GGCC
UKMR15_RS23720
1495661
1496434
+
Genic
-739
NZ_LR595897.1
1496588
1496600
AACATT
12
-
2
ATGTTA
UKMR15_RS23725
1496712
1497158
+
Intergenic
112
NZ_LR595897.1
1496797
1496810
ACGCCG
13
-
2
CGTCGG
UKMR15_RS23725
1496712
1497158
+
Genic
-85
NZ_LR595897.1
1497025
1497038
AGAGCG
13
-
2
CTCGCT
UKMR15_RS23725
1496712
1497158
+
Genic
-313
NZ_LR595897.1
1497318
1497330
ACG
12
-
4
TCG
UKMR15_RS23730
1497216
1497476
+
Genic
-102
NZ_LR595897.1
1497342
1497355
AACGCG
13
+
2
ACGCGA
UKMR15_RS23730
1497216
1497476
+
Genic
-126
NZ_LR595897.1
1497715
1497728
CCGCGG
13
+
2
CCGCGG
UKMR15_RS23735
1497518
1498327
+
Genic
-197
NZ_LR595897.1
1497974
1497986
AGCGCG
12
-
2
CGCTCG
UKMR15_RS23735
1497518
1498327
+
Genic
-456
NZ_LR595897.1
1498620
1498632
AGCCGC
12
+
2
AGCCGC
UKMR15_RS23740
1498434
1498652
+
Genic
-186
NZ_LR595897.1
1499580
1499592
ACAGCG
12
+
2
ACAGCG
UKMR15_RS23750
1499024
1500298
-
Genic
-556
NZ_LR595897.1
1499689
1499701
CCCGCG
12
+
2
CGCGCC
UKMR15_RS23750
1499024
1500298
-
Genic
-665