Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 8126 to 8150 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
1473184
1473197
ATCGCC
13
-
2
GCGATG
UKMR15_RS23615
1472759
1474162
+
Genic
-425
NZ_LR595897.1
1473317
1473330
ACGATC
13
-
2
TGATCG
UKMR15_RS23615
1472759
1474162
+
Genic
-558
NZ_LR595897.1
1473797
1473812
AGCGCG
15
-
2
TCGCGC
UKMR15_RS23615
1472759
1474162
+
Genic
-1038
NZ_LR595897.1
1473962
1473974
ACGTCG
12
+
2
CGTCGA
UKMR15_RS23615
1472759
1474162
+
Genic
-1203
NZ_LR595897.1
1474486
1474498
ATCGCG
12
+
2
CGCGAT
UKMR15_RS23620
1474236
1474727
+
Genic
-250
NZ_LR595897.1
1474721
1474733
ACCTG
12
+
2
ACCTG
UKMR15_RS23620
1474236
1474727
+
Genic
-485
NZ_LR595897.1
1475744
1475759
CCGCG
15
-
3
GGCGC
UKMR15_RS23625
1474746
1476155
+
Genic
-998
NZ_LR595897.1
1476082
1476094
ACGCCG
12
+
2
GACGCC
UKMR15_RS23625
1474746
1476155
+
Genic
-1336
NZ_LR595897.1
1476658
1476670
AGCGCG
12
-
2
CGCTCG
UKMR15_RS23630
1476370
1477173
-
Genic
-288
NZ_LR595897.1
1477526
1477539
AAATAG
13
-
2
TCTATT
UKMR15_RS23635
1477555
1477995
-
Intergenic
16
NZ_LR595897.1
1478442
1478454
CCGCG
12
-
2
GCGCG
UKMR15_RS23640
1478092
1480113
-
Genic
-350
NZ_LR595897.1
1480304
1480317
AGCCGG
13
-
2
CCGGCT
UKMR15_RS23645
1480262
1480819
+
Genic
-42
NZ_LR595897.1
1480829
1480841
CCGCGG
12
+
2
CGCGGC
UKMR15_RS23645
1480262
1480819
+
Intergenic
-567
NZ_LR595897.1
1481253
1481265
CCGGCG
12
+
2
CGGCGC
UKMR15_RS23650
1481075
1481905
+
Genic
-178
NZ_LR595897.1
1481383
1481395
CCCGCG
12
-
2
GGCGCG
UKMR15_RS23650
1481075
1481905
+
Genic
-308
NZ_LR595897.1
1481716
1481729
CCGCG
13
-
2
CGCGG
UKMR15_RS23650
1481075
1481905
+
Genic
-641
NZ_LR595897.1
1483051
1483064
CCCGCG
13
+
2
CGCCCG
UKMR15_RS23660
1482451
1483287
+
Genic
-600
NZ_LR595897.1
1483060
1483072
CCG
12
+
4
CCG
UKMR15_RS23660
1482451
1483287
+
Genic
-609
NZ_LR595897.1
1483354
1483366
CCGCG
12
-
2
CGCGG
UKMR15_RS23665
1483402
1484289
+
Intergenic
36
NZ_LR595897.1
1484075
1484087
AGCGCG
12
-
2
GCTCGC
UKMR15_RS23665
1483402
1484289
+
Genic
-673
NZ_LR595897.1
1485121
1485134
CCGCG
13
-
2
GCGCG
UKMR15_RS23670
1484549
1485178
-
Genic
-572
NZ_LR595897.1
1485422
1485434
AAGCGG
12
+
2
AGCGGA
UKMR15_RS23675
1485326
1485583
-
Genic
-96
NZ_LR595897.1
1485559
1485571
AGATGG
12
+
2
GAGATG
UKMR15_RS23675
1485326
1485583
-
Genic
-233
NZ_LR595897.1
1485865
1485878
CG
13
+
6
CG
UKMR15_RS23680
1485969
1486928
+
Intergenic
91
NZ_LR595897.1
1487844
1487856
CCGCG
12
-
2
CGGCG
UKMR15_RS23690
1487994
1488512
-
Intergenic
138