Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 8076 to 8100 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
1450617
1450630
CCGCG
13
+
2
GCCGC
arcD
1450543
1452033
+
Genic
-74
NZ_LR595897.1
1450833
1450845
ACGCGT
12
+
2
TACGCG
arcD
1450543
1452033
+
Genic
-290
NZ_LR595897.1
1451051
1451064
CCGCG
13
-
2
GCGCG
arcD
1450543
1452033
+
Genic
-508
NZ_LR595897.1
1451781
1451794
ACGCGC
13
-
2
GTGCGC
arcD
1450543
1452033
+
Genic
-1238
NZ_LR595897.1
1451790
1451802
ACGCG
12
+
2
CGCGA
arcD
1450543
1452033
+
Genic
-1247
NZ_LR595897.1
1451917
1451929
AGCGCG
12
+
2
AGCGCG
arcD
1450543
1452033
+
Genic
-1374
NZ_LR595897.1
1451977
1451989
AACGCG
12
-
2
TCGCGT
arcD
1450543
1452033
+
Genic
-1434
NZ_LR595897.1
1452438
1452452
CCCGCG
14
-
2
GCGCGG
UKMR15_RS23535
1452342
1452950
+
Genic
-96
NZ_LR595897.1
1452646
1452660
AGCGCG
14
-
2
GCTCGC
UKMR15_RS23535
1452342
1452950
+
Genic
-304
NZ_LR595897.1
1452994
1453006
CCGCG
12
+
2
CGCGC
UKMR15_RS23535
1452342
1452950
+
Intergenic
-652
NZ_LR595897.1
1453206
1453219
AAGCG
13
-
2
CGCTT
hflB
1453103
1455103
-
Genic
-103
NZ_LR595897.1
1453339
1453352
CCGCG
13
+
2
CGCGC
hflB
1453103
1455103
-
Genic
-236
NZ_LR595897.1
1454354
1454366
CCGCG
12
+
2
CGCGC
hflB
1453103
1455103
-
Genic
-1251
NZ_LR595897.1
1454361
1454375
ACGCCG
14
+
2
CGCCGA
hflB
1453103
1455103
-
Genic
-1258
NZ_LR595897.1
1454457
1454469
ACCGGC
12
-
2
TGCCGG
hflB
1453103
1455103
-
Genic
-1354
NZ_LR595897.1
1454893
1454905
CCG
12
+
4
CGC
hflB
1453103
1455103
-
Genic
-1790
NZ_LR595897.1
1454965
1454977
CCGCGG
12
+
2
CGCGGC
hflB
1453103
1455103
-
Genic
-1862
NZ_LR595897.1
1456106
1456118
CCGCGG
12
+
2
GCCGCG
UKMR15_RS23550
1456484
1458238
+
Intergenic
366
NZ_LR595897.1
1456189
1456203
CCCGCG
14
-
2
GGCGCG
UKMR15_RS23550
1456484
1458238
+
Intergenic
281
NZ_LR595897.1
1457905
1457917
CCGG
12
+
3
GCCG
UKMR15_RS23550
1456484
1458238
+
Genic
-1421
NZ_LR595897.1
1458566
1458579
ACGGCG
13
-
2
GCCGTC
UKMR15_RS23555
1458369
1459040
-
Genic
-197
NZ_LR595897.1
1458800
1458813
ACGGCC
13
-
2
GTGGCC
UKMR15_RS23555
1458369
1459040
-
Genic
-431
NZ_LR595897.1
1459066
1459078
AATGC
12
+
2
TGCAA
UKMR15_RS23555
1458369
1459040
-
Intergenic
-697
NZ_LR595897.1
1459627
1459641
CCGCGG
14
+
2
CGCGGC
UKMR15_RS23560
1459191
1460288
+
Genic
-436
NZ_LR595897.1
1460613
1460626
AACGCG
13
+
2
GAACGC
UKMR15_RS23565
1460285
1463395
+
Genic
-328