Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 8026 to 8050 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
1428141
1428153
CCGCG
12
-
2
GCGCG
UKMR15_RS23430
1426781
1428628
+
Genic
-1360
NZ_LR595897.1
1428172
1428184
CCGCGG
12
+
2
CGCGGC
UKMR15_RS23430
1426781
1428628
+
Genic
-1391
NZ_LR595897.1
1428362
1428376
AAGCGG
14
-
2
TCCGCT
UKMR15_RS23430
1426781
1428628
+
Genic
-1581
NZ_LR595897.1
1428546
1428558
AGCTCG
12
+
2
GCTCGA
UKMR15_RS23430
1426781
1428628
+
Genic
-1765
NZ_LR595897.1
1429054
1429066
AGCGCG
12
+
2
GCGAGC
UKMR15_RS23435
1428632
1431439
+
Genic
-422
NZ_LR595897.1
1429306
1429318
ACGAGC
12
-
2
CTCGTG
UKMR15_RS23435
1428632
1431439
+
Genic
-674
NZ_LR595897.1
1429441
1429454
AGCGCG
13
-
2
CTCGCG
UKMR15_RS23435
1428632
1431439
+
Genic
-809
NZ_LR595897.1
1429576
1429588
AGCGCG
12
-
2
GCGCTC
UKMR15_RS23435
1428632
1431439
+
Genic
-944
NZ_LR595897.1
1429596
1429608
CCGGCG
12
+
2
CGGCGC
UKMR15_RS23435
1428632
1431439
+
Genic
-964
NZ_LR595897.1
1429984
1429996
ACCGCG
12
-
2
GTCGCG
UKMR15_RS23435
1428632
1431439
+
Genic
-1352
NZ_LR595897.1
1430234
1430246
CCCG
12
-
3
GGCG
UKMR15_RS23435
1428632
1431439
+
Genic
-1602
NZ_LR595897.1
1430974
1430987
ACATGG
13
+
2
GACATG
UKMR15_RS23435
1428632
1431439
+
Genic
-2342
NZ_LR595897.1
1431437
1431450
AGCGCG
13
+
2
GAGCGC
UKMR15_RS23435
1428632
1431439
+
Genic
-2805
NZ_LR595897.1
1431447
1431461
CCCGCG
14
-
2
GCGCGG
UKMR15_RS23435
1428632
1431439
+
Intergenic
-2815
NZ_LR595897.1
1432254
1432266
CCGCG
12
+
2
CGCCG
UKMR15_RS23440
1431728
1432861
-
Genic
-526
NZ_LR595897.1
1432897
1432909
ATCCCC
12
+
2
CCCATC
UKMR15_RS23440
1431728
1432861
-
Intergenic
-1169
NZ_LR595897.1
1433679
1433691
ACCATG
12
-
2
TCATGG
UKMR15_RS23450
1433429
1433683
-
Genic
-250
NZ_LR595897.1
1434151
1434163
CCCCG
12
+
2
CCGCC
UKMR15_RS23455
1434619
1434774
+
Intergenic
456
NZ_LR595897.1
1435478
1435490
CCGGCG
12
+
2
GCGCCG
UKMR15_RS23460
1435128
1435751
-
Genic
-350
NZ_LR595897.1
1435507
1435519
ACGTCG
12
+
2
CGACGT
UKMR15_RS23460
1435128
1435751
-
Genic
-379
NZ_LR595897.1
1435773
1435788
CCGCG
15
-
3
GGCGC
UKMR15_RS23465
1435803
1438316
-
Intergenic
15
NZ_LR595897.1
1436157
1436169
ATCGC
12
+
2
CGCAT
UKMR15_RS23465
1435803
1438316
-
Genic
-354
NZ_LR595897.1
1436823
1436835
AAATCG
12
+
2
AAATCG
UKMR15_RS23465
1435803
1438316
-
Genic
-1020
NZ_LR595897.1
1437537
1437550
AGCGCG
13
+
2
AGCGCG
UKMR15_RS23465
1435803
1438316
-
Genic
-1734
NZ_LR595897.1
1438184
1438196
AGGCGC
12
+
2
GCGCAG
UKMR15_RS23465
1435803
1438316
-
Genic
-2381