Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 7976 to 8000 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
1399517
1399529
CCGGCG
12
+
2
CGGCGC
UKMR15_RS23310
1399493
1400578
-
Genic
-24
NZ_LR595897.1
1399734
1399746
CCCGCG
12
+
2
CGCCCG
UKMR15_RS23310
1399493
1400578
-
Genic
-241
NZ_LR595897.1
1400168
1400183
AGCGCG
15
+
2
GCGAGC
UKMR15_RS23310
1399493
1400578
-
Genic
-675
NZ_LR595897.1
1400409
1400422
AGCGCG
13
+
2
CGAGCG
UKMR15_RS23310
1399493
1400578
-
Genic
-916
NZ_LR595897.1
1400515
1400527
CCGCG
12
+
2
GCGCC
UKMR15_RS23310
1399493
1400578
-
Genic
-1022
NZ_LR595897.1
1400526
1400538
CCCGCG
12
+
2
CCGCGC
UKMR15_RS23310
1399493
1400578
-
Genic
-1033
NZ_LR595897.1
1400649
1400661
CCCGCG
12
+
2
CGCGCC
UKMR15_RS23310
1399493
1400578
-
Intergenic
-1156
NZ_LR595897.1
1401405
1401417
CCGCG
12
-
2
CGGCG
UKMR15_RS23310
1399493
1400578
-
Intergenic
-1912
NZ_LR595897.1
1401527
1401541
CCG
14
-
4
GGC
UKMR15_RS23320
1402376
1403386
-
Intergenic
835
NZ_LR595897.1
1402303
1402315
AGCGCG
12
+
2
CGAGCG
UKMR15_RS23320
1402376
1403386
-
Intergenic
61
NZ_LR595897.1
1403617
1403633
ATCGGC
16
-
2
CGATGC
UKMR15_RS23325
1403449
1403946
+
Genic
-168
NZ_LR595897.1
1403893
1403905
CCG
12
-
4
GCG
UKMR15_RS23325
1403449
1403946
+
Genic
-444
NZ_LR595897.1
1403899
1403912
CCGCG
13
-
2
GCGGC
UKMR15_RS23325
1403449
1403946
+
Genic
-450
NZ_LR595897.1
1404227
1404240
AGCGCG
13
-
2
GCGCTC
UKMR15_RS23330
1404105
1404797
+
Genic
-122
NZ_LR595897.1
1406650
1406662
CCGGCG
12
+
2
GCGCCG
UKMR15_RS23340
1405600
1406859
-
Genic
-1050
NZ_LR595897.1
1407135
1407151
ACATCG
16
+
2
ATCGAC
UKMR15_RS23345
1407079
1408548
-
Genic
-56
NZ_LR595897.1
1408692
1408704
CCCGG
12
-
2
CGGGC
UKMR15_RS23345
1407079
1408548
-
Intergenic
-1613
NZ_LR595897.1
1408714
1408726
CCGCG
12
-
2
GCGGC
UKMR15_RS23345
1407079
1408548
-
Intergenic
-1635
NZ_LR595897.1
1409243
1409255
AAGTCG
12
-
2
TTCGAC
UKMR15_RS23350
1408967
1409215
-
Intergenic
-276
NZ_LR595897.1
1409483
1409496
AAGGGG
13
+
2
GGAAGG
UKMR15_RS23350
1408967
1409215
-
Intergenic
-516
NZ_LR595897.1
1410490
1410502
ACGATC
12
-
2
GATCGT
irlS
1410233
1411627
-
Genic
-257
NZ_LR595897.1
1411635
1411647
AGCGCG
12
-
2
CGCGCT
irlR
1411624
1412313
-
Genic
-11
NZ_LR595897.1
1412862
1412876
AGCGCG
14
+
2
CGCGAG
UKMR15_RS23370
1412320
1415553
-
Genic
-542
NZ_LR595897.1
1413713
1413725
ACCGGC
12
-
2
CGGTGC
UKMR15_RS23370
1412320
1415553
-
Genic
-1393
NZ_LR595897.1
1414006
1414019
AAGGAG
13
-
2
TTCTCC
UKMR15_RS23370
1412320
1415553
-
Genic
-1686