Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 7951 to 7975 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
1383360
1383386
ACGCC
26
-
5
TGGCG
UKMR15_RS23230
1382365
1383336
+
Intergenic
-995
NZ_LR595897.1
1383986
1384000
ACGCTC
14
-
2
TGAGCG
UKMR15_RS23235
1383904
1384989
-
Genic
-82
NZ_LR595897.1
1384123
1384135
AGCCG
12
+
2
GCCGA
UKMR15_RS23235
1383904
1384989
-
Genic
-219
NZ_LR595897.1
1384168
1384180
CCGCG
12
+
2
CGCGC
UKMR15_RS23235
1383904
1384989
-
Genic
-264
NZ_LR595897.1
1384434
1384450
AACACG
16
+
2
CACGAA
UKMR15_RS23235
1383904
1384989
-
Genic
-530
NZ_LR595897.1
1385170
1385182
AGCGGG
12
+
2
GGAGCG
UKMR15_RS23235
1383904
1384989
-
Intergenic
-1266
NZ_LR595897.1
1385773
1385786
CCCGCG
13
-
2
GGGCGC
UKMR15_RS23240
1385855
1386526
+
Intergenic
69
NZ_LR595897.1
1385934
1385946
AACAGG
12
-
2
GTTCCT
UKMR15_RS23240
1385855
1386526
+
Genic
-79
NZ_LR595897.1
1386104
1386117
ACCGCG
13
-
2
TCGCGG
UKMR15_RS23240
1385855
1386526
+
Genic
-249
NZ_LR595897.1
1387476
1387495
AGCGCG
19
+
3
AGCGCG
UKMR15_RS23245
1386873
1387745
-
Genic
-603
NZ_LR595897.1
1387554
1387566
CCG
12
-
4
GCG
UKMR15_RS23245
1386873
1387745
-
Genic
-681
NZ_LR595897.1
1387579
1387591
AGCGCG
12
+
2
GCGCGA
UKMR15_RS23245
1386873
1387745
-
Genic
-706
NZ_LR595897.1
1388330
1388343
ACGCCG
13
+
2
CGACGC
UKMR15_RS23250
1387957
1388661
-
Genic
-373
NZ_LR595897.1
1388686
1388717
AAAGCG
31
+
5
AAAGCG
UKMR15_RS23250
1387957
1388661
-
Intergenic
-729
NZ_LR595897.1
1388894
1388906
CCGCG
12
+
2
GCCGC
UKMR15_RS23255
1388849
1389862
-
Genic
-45
NZ_LR595897.1
1388983
1388996
CCCGG
13
-
2
GGCCG
UKMR15_RS23255
1388849
1389862
-
Genic
-134
NZ_LR595897.1
1390376
1390388
CCCGCG
12
+
2
GCCCGC
UKMR15_RS23260
1390577
1390720
+
Intergenic
189
NZ_LR595897.1
1390962
1390974
ACG
12
+
4
CGA
UKMR15_RS23265
1390736
1391257
+
Genic
-226
NZ_LR595897.1
1392966
1392978
CCGCG
12
+
2
CGCGC
UKMR15_RS23275
1392136
1393122
+
Genic
-830
NZ_LR595897.1
1394624
1394637
ACGCG
13
+
2
GCGAC
UKMR15_RS23295
1394525
1395529
+
Genic
-99
NZ_LR595897.1
1394982
1394994
ACGCG
12
+
2
CGACG
UKMR15_RS23295
1394525
1395529
+
Genic
-457
NZ_LR595897.1
1397078
1397090
ACAGCT
12
+
2
GCTACA
UKMR15_RS23300
1395656
1398301
+
Genic
-1422
NZ_LR595897.1
1397597
1397609
ACAGCG
12
-
2
CGCTGT
UKMR15_RS23300
1395656
1398301
+
Genic
-1941
NZ_LR595897.1
1397768
1397780
ACATCG
12
+
2
TCGACA
UKMR15_RS23300
1395656
1398301
+
Genic
-2112
NZ_LR595897.1
1399190
1399203
AGCGCG
13
+
2
CGAGCG
UKMR15_RS23305
1398520
1399500
-
Genic
-670