Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 7926 to 7950 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
1369169
1369181
ACGCGC
12
+
2
ACGCGC
UKMR15_RS23200
1369839
1374491
+
Intergenic
658
NZ_LR595897.1
1369291
1369303
ATCGCC
12
-
2
ATGGCG
UKMR15_RS23200
1369839
1374491
+
Intergenic
536
NZ_LR595897.1
1369583
1369595
ACGCGC
12
+
2
ACGCGC
UKMR15_RS23200
1369839
1374491
+
Intergenic
244
NZ_LR595897.1
1369705
1369717
ATCGCC
12
-
2
ATGGCG
UKMR15_RS23200
1369839
1374491
+
Intergenic
122
NZ_LR595897.1
1370861
1370874
ACAGGT
13
-
2
CTGTAC
UKMR15_RS23200
1369839
1374491
+
Genic
-1022
NZ_LR595897.1
1371000
1371012
CCGCG
12
+
2
GCGCC
UKMR15_RS23200
1369839
1374491
+
Genic
-1161
NZ_LR595897.1
1372664
1372677
ATCGCG
13
+
2
GCGATC
UKMR15_RS23200
1369839
1374491
+
Genic
-2825
NZ_LR595897.1
1372901
1372913
CCGCG
12
+
2
GCGCC
UKMR15_RS23200
1369839
1374491
+
Genic
-3062
NZ_LR595897.1
1373533
1373545
CG
12
+
6
CG
UKMR15_RS23200
1369839
1374491
+
Genic
-3694
NZ_LR595897.1
1373977
1373990
CCGCG
13
+
2
CGCCG
UKMR15_RS23200
1369839
1374491
+
Genic
-4138
NZ_LR595897.1
1374311
1374323
CCGCGG
12
+
2
GCGGCC
UKMR15_RS23200
1369839
1374491
+
Genic
-4472
NZ_LR595897.1
1375041
1375053
ACCGTC
12
-
2
GTGACG
UKMR15_RS23205
1374574
1376232
+
Genic
-467
NZ_LR595897.1
1376233
1376245
CCGCG
12
+
2
GCCGC
UKMR15_RS23205
1374574
1376232
+
Intergenic
-1659
NZ_LR595897.1
1376243
1376255
CCGGCG
12
+
2
GCGCCG
UKMR15_RS23205
1374574
1376232
+
Intergenic
-1669
NZ_LR595897.1
1376265
1376279
CCG
14
+
4
GCC
UKMR15_RS23205
1374574
1376232
+
Intergenic
-1691
NZ_LR595897.1
1376927
1376942
ACCGTG
15
+
2
CCGTGA
UKMR15_RS23210
1376315
1377757
+
Genic
-612
NZ_LR595897.1
1377116
1377128
ATCGCG
12
+
2
TCGCGA
UKMR15_RS23210
1376315
1377757
+
Genic
-801
NZ_LR595897.1
1378614
1378627
CCGCG
13
-
2
GGCGC
UKMR15_RS23215
1378366
1380237
-
Genic
-248
NZ_LR595897.1
1378720
1378732
ACGGCG
12
-
2
CCGTCG
UKMR15_RS23215
1378366
1380237
-
Genic
-354
NZ_LR595897.1
1378956
1378968
CCGCG
12
+
2
GCCGC
UKMR15_RS23215
1378366
1380237
-
Genic
-590
NZ_LR595897.1
1380159
1380171
AGCGCG
12
+
2
CGCGAG
UKMR15_RS23215
1378366
1380237
-
Genic
-1793
NZ_LR595897.1
1380540
1380553
AGC
13
+
4
GCA
UKMR15_RS23220
1380272
1380685
-
Genic
-268
NZ_LR595897.1
1381625
1381638
AGCGC
13
+
2
CGCAG
UKMR15_RS23225
1380826
1382019
-
Genic
-799
NZ_LR595897.1
1382861
1382873
ACGCG
12
-
2
CGTCG
UKMR15_RS23230
1382365
1383336
+
Genic
-496
NZ_LR595897.1
1382886
1382898
ACGGC
12
+
2
CGGCA
UKMR15_RS23230
1382365
1383336
+
Genic
-521