Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 8001 to 8025 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
1414279
1414291
ACGCGC
12
-
2
TGCGCG
UKMR15_RS23370
1412320
1415553
-
Genic
-1959
NZ_LR595897.1
1414700
1414712
ACCGCG
12
-
2
TCGCGG
UKMR15_RS23370
1412320
1415553
-
Genic
-2380
NZ_LR595897.1
1414883
1414895
AACGAC
12
-
2
CGTTGT
UKMR15_RS23370
1412320
1415553
-
Genic
-2563
NZ_LR595897.1
1415407
1415421
ACCTGC
14
+
2
ACCTGC
UKMR15_RS23370
1412320
1415553
-
Genic
-3087
NZ_LR595897.1
1415903
1415915
CCCGCG
12
-
2
GCGCGG
UKMR15_RS23375
1415599
1417068
-
Genic
-304
NZ_LR595897.1
1416942
1416954
CCGCGG
12
+
2
CGCGGC
UKMR15_RS23375
1415599
1417068
-
Genic
-1343
NZ_LR595897.1
1417025
1417039
CCGCGG
14
+
2
CGGCCG
UKMR15_RS23375
1415599
1417068
-
Genic
-1426
NZ_LR595897.1
1417367
1417379
AGCCGC
12
+
2
AGCCGC
UKMR15_RS23380
1417079
1418464
-
Genic
-288
NZ_LR595897.1
1418278
1418291
AAGTCG
13
+
2
AGTCGA
UKMR15_RS23380
1417079
1418464
-
Genic
-1199
NZ_LR595897.1
1418317
1418330
ACGGAG
13
+
2
GACGGA
UKMR15_RS23380
1417079
1418464
-
Genic
-1238
NZ_LR595897.1
1418615
1418627
CCCCG
12
-
2
GGCGG
UKMR15_RS23385
1418699
1418983
-
Intergenic
72
NZ_LR595897.1
1420671
1420683
ACGAG
12
-
2
CTCGT
UKMR15_RS23395
1420176
1420664
-
Intergenic
-495
NZ_LR595897.1
1420690
1420702
ACGCGC
12
+
2
ACGCGC
UKMR15_RS23395
1420176
1420664
-
Intergenic
-514
NZ_LR595897.1
1420702
1420717
CCGCG
15
-
3
CGGCG
UKMR15_RS23395
1420176
1420664
-
Intergenic
-526
NZ_LR595897.1
1421088
1421103
CCGCGG
15
+
2
GCGGCC
UKMR15_RS23400
1420996
1421481
+
Genic
-92
NZ_LR595897.1
1422262
1422274
ACCGC
12
+
2
CGCAC
ald
1421836
1422951
-
Genic
-426
NZ_LR595897.1
1422644
1422657
ATCCCG
13
-
2
GATCGG
ald
1421836
1422951
-
Genic
-808
NZ_LR595897.1
1422725
1422738
AAGGTC
13
-
2
CCTTGA
ald
1421836
1422951
-
Genic
-889
NZ_LR595897.1
1423920
1423932
AAAAGG
12
-
2
CCTTTT
UKMR15_RS23410
1423676
1424005
-
Genic
-244
NZ_LR595897.1
1426211
1426223
AACCG
12
+
2
ACCGA
UKMR15_RS23425
1426209
1426784
+
Genic
-2
NZ_LR595897.1
1426376
1426389
CCCGCG
13
+
2
GCGCCC
UKMR15_RS23425
1426209
1426784
+
Genic
-167
NZ_LR595897.1
1427256
1427268
ACCGTC
12
+
2
CGTCAC
UKMR15_RS23430
1426781
1428628
+
Genic
-475
NZ_LR595897.1
1427514
1427526
ATCGC
12
+
2
GCATC
UKMR15_RS23430
1426781
1428628
+
Genic
-733
NZ_LR595897.1
1427566
1427579
AGCGCG
13
-
2
CTCGCG
UKMR15_RS23430
1426781
1428628
+
Genic
-785
NZ_LR595897.1
1428120
1428134
AGATCG
14
-
2
CGATCT
UKMR15_RS23430
1426781
1428628
+
Genic
-1339