Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 8251 to 8275 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
1546907
1546919
ACAGCC
12
+
2
AGCCAC
UKMR15_RS23890
1546634
1547866
-
Genic
-273
NZ_LR595897.1
1547283
1547295
ACGGCG
12
+
2
CGGCGA
UKMR15_RS23890
1546634
1547866
-
Genic
-649
NZ_LR595897.1
1548734
1548746
ACGTCG
12
+
2
CGTCGA
UKMR15_RS23895
1548499
1548906
+
Genic
-235
NZ_LR595897.1
1549733
1549745
AGCGCG
12
-
2
GCGCTC
UKMR15_RS23905
1549677
1551194
+
Genic
-56
NZ_LR595897.1
1550239
1550251
AGC
12
-
4
GCT
UKMR15_RS23905
1549677
1551194
+
Genic
-562
NZ_LR595897.1
1550752
1550764
ACGCG
12
+
2
CGACG
UKMR15_RS23905
1549677
1551194
+
Genic
-1075
NZ_LR595897.1
1551319
1551331
AGATCC
12
+
2
CAGATC
UKMR15_RS23910
1551191
1551430
+
Genic
-128
NZ_LR595897.1
1551474
1551488
CCGGCG
14
+
2
GCGCCG
UKMR15_RS23910
1551191
1551430
+
Intergenic
-283
NZ_LR595897.1
1551509
1551522
AAGCAC
13
+
2
CAAGCA
UKMR15_RS23915
1551568
1552491
+
Intergenic
46
NZ_LR595897.1
1552341
1552354
ACCGAT
13
+
2
GATACC
UKMR15_RS23915
1551568
1552491
+
Genic
-773
NZ_LR595897.1
1552501
1552514
CCCGG
13
+
2
GCCCG
UKMR15_RS23915
1551568
1552491
+
Intergenic
-933
NZ_LR595897.1
1552855
1552867
CCG
12
+
4
CGC
UKMR15_RS23920
1552582
1552878
+
Genic
-273
NZ_LR595897.1
1556451
1556463
CCGGCG
12
+
2
CCGGCG
UKMR15_RS23945
1555748
1557565
-
Genic
-703
NZ_LR595897.1
1557500
1557512
CG
12
+
6
GC
UKMR15_RS23945
1555748
1557565
-
Genic
-1752
NZ_LR595897.1
1557683
1557697
AGCGCG
14
+
2
GCGCGA
UKMR15_RS23950
1557562
1558509
-
Genic
-121
NZ_LR595897.1
1557780
1557792
CCGCGG
12
+
2
CGCGGC
UKMR15_RS23950
1557562
1558509
-
Genic
-218
NZ_LR595897.1
1558593
1558605
ACCCCG
12
-
2
GGGTCG
UKMR15_RS23955
1558521
1559585
-
Genic
-72
NZ_LR595897.1
1558728
1558740
CG
12
+
6
GC
UKMR15_RS23955
1558521
1559585
-
Genic
-207
NZ_LR595897.1
1559362
1559375
CG
13
+
6
GC
UKMR15_RS23955
1558521
1559585
-
Genic
-841
NZ_LR595897.1
1559598
1559610
CCGCG
12
-
2
GCGGC
UKMR15_RS23960
1559582
1560901
-
Genic
-16
NZ_LR595897.1
1559608
1559620
AGGCCG
12
+
2
GCCGAG
UKMR15_RS23960
1559582
1560901
-
Genic
-26
NZ_LR595897.1
1559743
1559756
ACCATC
13
+
2
CACCAT
UKMR15_RS23960
1559582
1560901
-
Genic
-161
NZ_LR595897.1
1560333
1560346
CCG
13
-
4
CGG
UKMR15_RS23960
1559582
1560901
-
Genic
-751
NZ_LR595897.1
1560436
1560449
CCGCGG
13
+
2
GCGGCC
UKMR15_RS23960
1559582
1560901
-
Genic
-854
NZ_LR595897.1
1560758
1560771
CCGCG
13
+
2
CGCGC
UKMR15_RS23960
1559582
1560901
-
Genic
-1176