Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 8276 to 8300 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
1560772
1560794
ACATCG
22
-
3
GTCGAT
UKMR15_RS23960
1559582
1560901
-
Genic
-1190
NZ_LR595897.1
1561193
1561205
ACATCG
12
-
2
TGTCGA
UKMR15_RS23965
1560898
1565601
-
Genic
-295
NZ_LR595897.1
1561607
1561619
CG
12
+
6
GC
UKMR15_RS23965
1560898
1565601
-
Genic
-709
NZ_LR595897.1
1561820
1561832
CCGGCG
12
+
2
GCGCCG
UKMR15_RS23965
1560898
1565601
-
Genic
-922
NZ_LR595897.1
1561924
1561936
AGCGCG
12
+
2
AGCGCG
UKMR15_RS23965
1560898
1565601
-
Genic
-1026
NZ_LR595897.1
1562015
1562031
AGCGCG
16
+
2
GCGCGA
UKMR15_RS23965
1560898
1565601
-
Genic
-1117
NZ_LR595897.1
1562076
1562088
AGCGGC
12
+
2
CGGCAG
UKMR15_RS23965
1560898
1565601
-
Genic
-1178
NZ_LR595897.1
1562168
1562182
ACGGCC
14
+
2
CCACGG
UKMR15_RS23965
1560898
1565601
-
Genic
-1270
NZ_LR595897.1
1562298
1562310
AGCGGC
12
+
2
CAGCGG
UKMR15_RS23965
1560898
1565601
-
Genic
-1400
NZ_LR595897.1
1563902
1563914
AGCGGC
12
+
2
GCGGCA
UKMR15_RS23965
1560898
1565601
-
Genic
-3004
NZ_LR595897.1
1564376
1564388
ACGCTG
12
-
2
TCAGCG
UKMR15_RS23965
1560898
1565601
-
Genic
-3478
NZ_LR595897.1
1564687
1564702
CCGG
15
+
3
GCCG
UKMR15_RS23965
1560898
1565601
-
Genic
-3789
NZ_LR595897.1
1564752
1564764
ACGCCC
12
+
2
CCACGC
UKMR15_RS23965
1560898
1565601
-
Genic
-3854
NZ_LR595897.1
1565863
1565875
AGC
12
+
4
GCA
UKMR15_RS23970
1565619
1569659
-
Genic
-244
NZ_LR595897.1
1566716
1566730
CCGCG
14
-
2
GCGCG
UKMR15_RS23970
1565619
1569659
-
Genic
-1097
NZ_LR595897.1
1567192
1567204
CCGCG
12
+
2
GCGCC
UKMR15_RS23970
1565619
1569659
-
Genic
-1573
NZ_LR595897.1
1567928
1567941
ACATCG
13
+
2
GACATC
UKMR15_RS23970
1565619
1569659
-
Genic
-2309
NZ_LR595897.1
1568091
1568103
CCCG
12
+
3
CCGC
UKMR15_RS23970
1565619
1569659
-
Genic
-2472
NZ_LR595897.1
1568128
1568142
CCGCG
14
+
2
GCGCC
UKMR15_RS23970
1565619
1569659
-
Genic
-2509
NZ_LR595897.1
1568286
1568298
CCGCGG
12
+
2
GCGGCC
UKMR15_RS23970
1565619
1569659
-
Genic
-2667
NZ_LR595897.1
1569162
1569174
ATCGGC
12
+
2
TCGGCA
UKMR15_RS23970
1565619
1569659
-
Genic
-3543
NZ_LR595897.1
1569876
1569888
ACGGCG
12
-
2
CGCCGT
UKMR15_RS23975
1569656
1570717
-
Genic
-220
NZ_LR595897.1
1570813
1570826
CCGCG
13
-
2
GCGGC
UKMR15_RS23980
1570743
1580189
-
Genic
-70
NZ_LR595897.1
1570965
1570977
AGCCGC
12
-
2
TGCGGC
UKMR15_RS23980
1570743
1580189
-
Genic
-222
NZ_LR595897.1
1571086
1571098
CCGG
12
+
3
CGGC
UKMR15_RS23980
1570743
1580189
-
Genic
-343