Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 8326 to 8350 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
1580797
1580809
AACGCG
12
+
2
ACGCGA
UKMR15_RS23985
1580205
1580903
-
Genic
-592
NZ_LR595897.1
1582101
1582113
CG
12
+
6
GC
UKMR15_RS24000
1581849
1583330
+
Genic
-252
NZ_LR595897.1
1584236
1584256
ACGCGC
20
+
3
CGCACG
UKMR15_RS24010
1583996
1584469
+
Genic
-240
NZ_LR595897.1
1584721
1584735
AATGAG
14
-
2
TCATTC
UKMR15_RS24015
1584591
1584725
-
Genic
-130
NZ_LR595897.1
1584771
1584786
AAATCG
15
+
2
ATCGAA
UKMR15_RS24015
1584591
1584725
-
Intergenic
-180
NZ_LR595897.1
1585418
1585432
ACGCGC
14
+
2
GCACGC
UKMR15_RS24020
1585004
1586299
+
Genic
-414
NZ_LR595897.1
1586230
1586242
ACGCG
12
+
2
CGCGA
UKMR15_RS24020
1585004
1586299
+
Genic
-1226
NZ_LR595897.1
1586318
1586330
CCCGCG
12
+
2
GCCCGC
UKMR15_RS24020
1585004
1586299
+
Intergenic
-1314
NZ_LR595897.1
1587909
1587922
ACCGGC
13
+
2
ACCGGC
UKMR15_RS24025
1586698
1588944
+
Genic
-1211
NZ_LR595897.1
1587981
1587993
AACCCG
12
+
2
CCGAAC
UKMR15_RS24025
1586698
1588944
+
Genic
-1283
NZ_LR595897.1
1590301
1590313
ACGCG
12
+
2
GACGC
UKMR15_RS24035
1589689
1590372
+
Genic
-612
NZ_LR595897.1
1595513
1595525
AGCGCG
12
+
2
AGCGCG
UKMR15_RS24065
1594013
1596253
-
Genic
-1500
NZ_LR595897.1
1595931
1595943
ACAGAT
12
+
2
GATACA
UKMR15_RS24065
1594013
1596253
-
Genic
-1918
NZ_LR595897.1
1596952
1596967
ACGGGC
15
-
2
CCGTGC
UKMR15_RS24070
1596267
1599053
-
Genic
-685
NZ_LR595897.1
1597175
1597187
CCG
12
+
4
CGC
UKMR15_RS24070
1596267
1599053
-
Genic
-908
NZ_LR595897.1
1597611
1597625
ACGCGC
14
-
2
TGCGCG
UKMR15_RS24070
1596267
1599053
-
Genic
-1344
NZ_LR595897.1
1600660
1600672
AATTC
12
+
2
TCAAT
UKMR15_RS24080
1600556
1601251
+
Genic
-104
NZ_LR595897.1
1601865
1601877
AAGTG
12
+
2
AGTGA
UKMR15_RS24085
1601224
1602504
+
Genic
-641
NZ_LR595897.1
1604176
1604188
CCCG
12
+
3
CGCC
UKMR15_RS24095
1604413
1605012
+
Intergenic
225
NZ_LR595897.1
1604524
1604537
ACGGCG
13
-
2
CCGTCG
UKMR15_RS24095
1604413
1605012
+
Genic
-111
NZ_LR595897.1
1604694
1604706
CCCGCG
12
+
2
CGCGCC
UKMR15_RS24095
1604413
1605012
+
Genic
-281
NZ_LR595897.1
1605032
1605047
AAATGC
15
+
2
GCAAAT
UKMR15_RS24095
1604413
1605012
+
Intergenic
-619
NZ_LR595897.1
1605080
1605092
CCGCG
12
+
2
CGCGC
UKMR15_RS24100
1605125
1605274
+
Intergenic
33
NZ_LR595897.1
1605161
1605174
ACCCG
13
+
2
CCGAC
UKMR15_RS24100
1605125
1605274
+
Genic
-36
NZ_LR595897.1
1605213
1605226
ACCATC
13
+
2
CCATCA
UKMR15_RS24100
1605125
1605274
+
Genic
-88