Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 8376 to 8400 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
1627552
1627564
CCCCCG
12
+
2
CCCCGC
UKMR15_RS24180
1626501
1627523
-
Intergenic
-1051
NZ_LR595897.1
1627669
1627686
CCGCG
17
-
3
GCGCG
UKMR15_RS24180
1626501
1627523
-
Intergenic
-1168
NZ_LR595897.1
1627799
1627816
ACGGCG
17
-
2
CGCCGT
UKMR15_RS24185
1627995
1628819
+
Intergenic
179
NZ_LR595897.1
1629832
1629844
ACGATC
12
+
2
GATCAC
UKMR15_RS24190
1628853
1629989
+
Genic
-979
NZ_LR595897.1
1630977
1630991
CCGCG
14
-
2
GCGCG
UKMR15_RS24195
1630398
1630868
-
Intergenic
-579
NZ_LR595897.1
1631663
1631675
ACGAT
12
+
2
ATACG
UKMR15_RS24200
1631660
1632940
+
Genic
-3
NZ_LR595897.1
1632551
1632563
ACGGGC
12
+
2
ACGGGC
UKMR15_RS24200
1631660
1632940
+
Genic
-891
NZ_LR595897.1
1632641
1632656
AGCAGG
15
+
2
AGGAGC
UKMR15_RS24200
1631660
1632940
+
Genic
-981
NZ_LR595897.1
1632692
1632704
ACGAGC
12
+
2
GCACGA
UKMR15_RS24200
1631660
1632940
+
Genic
-1032
NZ_LR595897.1
1633400
1633412
AGGATC
12
-
2
CTGATC
UKMR15_RS24205
1633083
1633961
+
Genic
-317
NZ_LR595897.1
1634068
1634080
ACGCCG
12
+
2
ACGCCG
UKMR15_RS24210
1633949
1634761
+
Genic
-119
NZ_LR595897.1
1634296
1634308
ACCGCG
12
-
2
GTCGCG
UKMR15_RS24210
1633949
1634761
+
Genic
-347
NZ_LR595897.1
1634576
1634590
AGCGCG
14
-
2
TCGCGC
UKMR15_RS24210
1633949
1634761
+
Genic
-627
NZ_LR595897.1
1635672
1635684
AGCGCG
12
-
2
CGCGCT
UKMR15_RS24215
1634783
1635817
+
Genic
-889
NZ_LR595897.1
1635900
1635912
ACGGCG
12
+
2
CGGCGA
ugpC
1635821
1637014
+
Genic
-79
NZ_LR595897.1
1636718
1636730
AGCGCG
12
-
2
CGCTCG
ugpC
1635821
1637014
+
Genic
-897
NZ_LR595897.1
1636852
1636864
AACGTG
12
-
2
ACGTTC
ugpC
1635821
1637014
+
Genic
-1031
NZ_LR595897.1
1636935
1636947
ACGCCG
12
+
2
CGCCGA
ugpC
1635821
1637014
+
Genic
-1114
NZ_LR595897.1
1638685
1638697
CCGCGG
12
+
2
GCCGCG
xylB
1638059
1639519
+
Genic
-626
NZ_LR595897.1
1639089
1639103
CG
14
+
7
CG
xylB
1638059
1639519
+
Genic
-1030
NZ_LR595897.1
1639341
1639355
CCGCG
14
-
2
CGGCG
xylB
1638059
1639519
+
Genic
-1282
NZ_LR595897.1
1640939
1640952
CG
13
+
6
GC
UKMR15_RS24240
1640135
1641136
+
Genic
-804
NZ_LR595897.1
1641195
1641209
AACGAC
14
-
2
CGTTGT
UKMR15_RS24240
1640135
1641136
+
Intergenic
-1060
NZ_LR595897.1
1642418
1642431
AGCGCG
13
-
2
TCGCGC
UKMR15_RS24245
1641491
1643203
+
Genic
-927
NZ_LR595897.1
1642731
1642743
ACGGCT
12
+
2
CTACGG
UKMR15_RS24245
1641491
1643203
+
Genic
-1240