Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 8426 to 8450 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
1659093
1659105
AGGCGC
12
-
2
CTGCGC
UKMR15_RS24300
1658458
1660650
+
Genic
-635
NZ_LR595897.1
1659853
1659865
CCCGCG
12
-
2
GCGCGG
UKMR15_RS24300
1658458
1660650
+
Genic
-1395
NZ_LR595897.1
1659882
1659895
CCGCG
13
+
2
CGCGC
UKMR15_RS24300
1658458
1660650
+
Genic
-1424
NZ_LR595897.1
1660034
1660046
AATCGG
12
-
2
TCCGAT
UKMR15_RS24300
1658458
1660650
+
Genic
-1576
NZ_LR595897.1
1660364
1660376
AACGCG
12
+
2
CGCGAA
UKMR15_RS24300
1658458
1660650
+
Genic
-1906
NZ_LR595897.1
1660397
1660411
ACCACG
14
-
2
GTGGTC
UKMR15_RS24300
1658458
1660650
+
Genic
-1939
NZ_LR595897.1
1660875
1660887
CCG
12
+
4
CGC
UKMR15_RS24305
1660703
1661098
+
Genic
-172
NZ_LR595897.1
1661133
1661145
ACGCCG
12
-
2
CGTCGG
UKMR15_RS24305
1660703
1661098
+
Intergenic
-430
NZ_LR595897.1
1661500
1661513
CCCCG
13
+
2
CGCCC
UKMR15_RS24310
1661185
1662207
-
Genic
-315
NZ_LR595897.1
1662291
1662303
CCGGCG
12
+
2
CGCCGG
UKMR15_RS24315
1662238
1663617
-
Genic
-53
NZ_LR595897.1
1662825
1662838
AGCGCG
13
+
2
CGCGAG
UKMR15_RS24315
1662238
1663617
-
Genic
-587
NZ_LR595897.1
1663201
1663213
AGCCG
12
+
2
GCCGA
UKMR15_RS24315
1662238
1663617
-
Genic
-963
NZ_LR595897.1
1663839
1663853
AGATCG
14
+
2
CGAGAT
UKMR15_RS24320
1663642
1664961
-
Genic
-197
NZ_LR595897.1
1663931
1663944
ATCGCG
13
+
2
TCGCGA
UKMR15_RS24320
1663642
1664961
-
Genic
-289
NZ_LR595897.1
1665322
1665335
CCGCG
13
-
2
GCGGC
UKMR15_RS24325
1665132
1666103
+
Genic
-190
NZ_LR595897.1
1666368
1666384
CCCGCG
16
-
2
GGCGCG
UKMR15_RS24330
1666273
1666701
-
Genic
-95
NZ_LR595897.1
1666855
1666867
CCCCCG
12
+
2
CCCGCC
UKMR15_RS24335
1666747
1667754
-
Genic
-108
NZ_LR595897.1
1666962
1666974
CCG
12
-
4
CGG
UKMR15_RS24335
1666747
1667754
-
Genic
-215
NZ_LR595897.1
1668669
1668685
ACGCG
16
+
3
GACGC
UKMR15_RS24340
1667878
1668621
+
Intergenic
-791
NZ_LR595897.1
1668701
1668714
ACGCG
13
-
2
CGCGT
UKMR15_RS24340
1667878
1668621
+
Intergenic
-823
NZ_LR595897.1
1669317
1669329
CCGCGG
12
+
2
GCCGCG
UKMR15_RS24345
1669041
1670459
-
Genic
-276
NZ_LR595897.1
1669792
1669804
ACGCGC
12
+
2
GCACGC
UKMR15_RS24345
1669041
1670459
-
Genic
-751
NZ_LR595897.1
1672428
1672441
ACGGGC
13
+
2
CGGGCA
UKMR15_RS24350
1671500
1672537
-
Genic
-928
NZ_LR595897.1
1673655
1673667
ACGAGC
12
+
2
AGCACG
UKMR15_RS24355
1672602
1673759
-
Genic
-1053
NZ_LR595897.1
1673824
1673836
AAGGC
12
-
2
GCCTT
UKMR15_RS24360
1673758
1674390
+
Genic
-66