Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 8401 to 8425 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
1643601
1643614
CG
13
+
6
CG
UKMR15_RS24255
1643793
1648049
-
Intergenic
179
NZ_LR595897.1
1643686
1643698
CCGCG
12
-
2
GCGCG
UKMR15_RS24255
1643793
1648049
-
Intergenic
95
NZ_LR595897.1
1643760
1643772
CCGCG
12
+
2
GCGCC
UKMR15_RS24255
1643793
1648049
-
Intergenic
21
NZ_LR595897.1
1644202
1644214
ACGGGC
12
-
2
TGCCCG
UKMR15_RS24255
1643793
1648049
-
Genic
-409
NZ_LR595897.1
1644594
1644606
ACGCG
12
+
2
CGCGA
UKMR15_RS24255
1643793
1648049
-
Genic
-801
NZ_LR595897.1
1645219
1645233
ACGGCG
14
-
2
CGTCGC
UKMR15_RS24255
1643793
1648049
-
Genic
-1426
NZ_LR595897.1
1645474
1645487
CCGCGG
13
+
2
CGGCCG
UKMR15_RS24255
1643793
1648049
-
Genic
-1681
NZ_LR595897.1
1645906
1645918
AGCGCG
12
+
2
GCGCGA
UKMR15_RS24255
1643793
1648049
-
Genic
-2113
NZ_LR595897.1
1648033
1648045
AGCGCG
12
-
2
CGCTCG
UKMR15_RS24255
1643793
1648049
-
Genic
-4240
NZ_LR595897.1
1648308
1648321
CCG
13
+
4
GCC
nirD
1648093
1648443
-
Genic
-215
NZ_LR595897.1
1650944
1650956
CCGCG
12
-
2
CGCGG
nirB
1648481
1651036
-
Genic
-2463
NZ_LR595897.1
1651866
1651878
ACGCGC
12
+
2
CACGCG
UKMR15_RS24270
1651080
1652405
-
Genic
-786
NZ_LR595897.1
1651935
1651950
CCCGCG
15
+
2
GCGCCC
UKMR15_RS24270
1651080
1652405
-
Genic
-855
NZ_LR595897.1
1651960
1651974
CCGCGG
14
+
2
CGGCCG
UKMR15_RS24270
1651080
1652405
-
Genic
-880
NZ_LR595897.1
1652907
1652920
AGCCCG
13
+
2
CCGAGC
cobA
1653358
1654182
+
Intergenic
438
NZ_LR595897.1
1653402
1653414
AGATCC
12
-
2
GATCTG
cobA
1653358
1654182
+
Genic
-44
NZ_LR595897.1
1653490
1653502
AGCGCG
12
-
2
TCGCGC
cobA
1653358
1654182
+
Genic
-132
NZ_LR595897.1
1653502
1653514
CG
12
+
6
CG
cobA
1653358
1654182
+
Genic
-144
NZ_LR595897.1
1653722
1653734
CCGCGG
12
+
2
CGCGGC
cobA
1653358
1654182
+
Genic
-364
NZ_LR595897.1
1654205
1654217
CCCGCG
12
+
2
CCGCGC
cobA
1653358
1654182
+
Intergenic
-847
NZ_LR595897.1
1654327
1654341
ACACCG
14
+
2
CACCGA
UKMR15_RS24280
1654284
1654880
+
Genic
-43
NZ_LR595897.1
1654518
1654530
CCGCG
12
+
2
CCGCG
UKMR15_RS24280
1654284
1654880
+
Genic
-234
NZ_LR595897.1
1654650
1654662
AGCGCG
12
-
2
TCGCGC
UKMR15_RS24280
1654284
1654880
+
Genic
-366
NZ_LR595897.1
1656372
1656385
CCGCG
13
+
2
CGCCG
UKMR15_RS24290
1656229
1656861
-
Genic
-143
NZ_LR595897.1
1658216
1658230
AGCGGC
14
+
2
GCAGCG
UKMR15_RS24300
1658458
1660650
+
Intergenic
228