Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 8451 to 8475 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
1674128
1674180
ATCGC
52
+
10
CGCAT
UKMR15_RS24360
1673758
1674390
+
Genic
-370
NZ_LR595897.1
1674749
1674766
ATCGCC
17
+
2
CGCCAT
UKMR15_RS24365
1674569
1674721
-
Intergenic
-180
NZ_LR595897.1
1675063
1675077
CCGCG
14
+
2
CGCCG
UKMR15_RS24365
1674569
1674721
-
Intergenic
-494
NZ_LR595897.1
1675777
1675790
CCCGCG
13
+
2
CCGCGC
UKMR15_RS24370
1675471
1677534
+
Genic
-306
NZ_LR595897.1
1675886
1675899
AGCGCG
13
+
2
CGCGAG
UKMR15_RS24370
1675471
1677534
+
Genic
-415
NZ_LR595897.1
1676179
1676191
ACGCCG
12
+
2
CCGACG
UKMR15_RS24370
1675471
1677534
+
Genic
-708
NZ_LR595897.1
1677379
1677391
AACGCG
12
+
2
ACGCGA
UKMR15_RS24370
1675471
1677534
+
Genic
-1908
NZ_LR595897.1
1678214
1678226
CCG
12
+
4
CGC
UKMR15_RS24375
1677797
1678129
-
Intergenic
-417
NZ_LR595897.1
1678595
1678607
CCGG
12
+
3
CGGC
UKMR15_RS24380
1678401
1679183
+
Genic
-194
NZ_LR595897.1
1678988
1679002
AGGCCG
14
+
2
GCCGAG
UKMR15_RS24380
1678401
1679183
+
Genic
-587
NZ_LR595897.1
1679457
1679471
ACGCGC
14
-
2
GTGCGC
UKMR15_RS24385
1679194
1682010
+
Genic
-263
NZ_LR595897.1
1682880
1682919
AGGCGC
39
-
6
GCGCCT
UKMR15_RS24395
1682647
1683468
+
Genic
-233
NZ_LR595897.1
1682917
1682938
AACTCG
21
-
3
CGAGTT
UKMR15_RS24395
1682647
1683468
+
Genic
-270
NZ_LR595897.1
1683089
1683101
CCGCG
12
+
2
CCGCG
UKMR15_RS24395
1682647
1683468
+
Genic
-442
NZ_LR595897.1
1683270
1683282
ACAGCG
12
-
2
TCGCTG
UKMR15_RS24395
1682647
1683468
+
Genic
-623
NZ_LR595897.1
1683404
1683418
CCG
14
-
4
CGG
UKMR15_RS24395
1682647
1683468
+
Genic
-757
NZ_LR595897.1
1683415
1683439
AGCGCG
24
+
4
GCGCGA
UKMR15_RS24395
1682647
1683468
+
Genic
-768
NZ_LR595897.1
1683736
1683748
CCGCG
12
-
2
CGGCG
UKMR15_RS24400
1683753
1687001
-
Intergenic
5
NZ_LR595897.1
1684257
1684271
AGGCGC
14
-
2
GCCTGC
UKMR15_RS24400
1683753
1687001
-
Genic
-504
NZ_LR595897.1
1685899
1685913
AACGTG
14
-
2
TCACGT
UKMR15_RS24400
1683753
1687001
-
Genic
-2146
NZ_LR595897.1
1685929
1685941
CCGG
12
+
3
CGGC
UKMR15_RS24400
1683753
1687001
-
Genic
-2176
NZ_LR595897.1
1686466
1686480
CCGCG
14
+
2
GCGCC
UKMR15_RS24400
1683753
1687001
-
Genic
-2713
NZ_LR595897.1
1687155
1687168
CCCGCG
13
-
2
CGCGGG
UKMR15_RS24405
1687048
1687254
-
Genic
-107
NZ_LR595897.1
1687703
1687715
ACGCTC
12
-
2
GCGTGA
UKMR15_RS24410
1687273
1688562
-
Genic
-430
NZ_LR595897.1
1688788
1688800
AGCGGC
12
+
2
CGGCAG
UKMR15_RS24415
1688567
1701364
-
Genic
-221