Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 8501 to 8525 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
1705001
1705013
CCGCG
12
-
2
GCGGC
UKMR15_RS24435
1704814
1706574
-
Genic
-187
NZ_LR595897.1
1705804
1705816
ACAGCG
12
+
2
AGCGAC
UKMR15_RS24435
1704814
1706574
-
Genic
-990
NZ_LR595897.1
1706746
1706758
ACGAGC
12
+
2
GCACGA
UKMR15_RS24440
1706571
1708331
-
Genic
-175
NZ_LR595897.1
1706864
1706877
ACG
13
+
4
GAC
UKMR15_RS24440
1706571
1708331
-
Genic
-293
NZ_LR595897.1
1706905
1706924
CCCGCG
19
+
3
CCGCGC
UKMR15_RS24440
1706571
1708331
-
Genic
-334
NZ_LR595897.1
1707222
1707235
AGATCG
13
+
2
AGATCG
UKMR15_RS24440
1706571
1708331
-
Genic
-651
NZ_LR595897.1
1708087
1708100
ACGGGC
13
+
2
CGGGCA
UKMR15_RS24440
1706571
1708331
-
Genic
-1516
NZ_LR595897.1
1708732
1708744
AATGGC
12
-
2
ATTGCC
UKMR15_RS24445
1708740
1708970
+
Genic
-4
NZ_LR595897.1
1710543
1710555
CCGG
12
+
3
GCCG
UKMR15_RS24455
1710331
1710921
+
Genic
-212
NZ_LR595897.1
1710923
1710937
CCGCG
14
-
2
CGCGG
UKMR15_RS24455
1710331
1710921
+
Intergenic
-592
NZ_LR595897.1
1711235
1711253
CCGGCG
18
+
3
CGGCGC
UKMR15_RS24460
1711057
1712127
+
Genic
-178
NZ_LR595897.1
1711672
1711687
AGCGCG
15
-
2
TCGCGC
UKMR15_RS24460
1711057
1712127
+
Genic
-615
NZ_LR595897.1
1711699
1711711
CCG
12
+
4
CCG
UKMR15_RS24460
1711057
1712127
+
Genic
-642
NZ_LR595897.1
1711983
1711995
ACCGGC
12
+
2
CGGCAC
UKMR15_RS24460
1711057
1712127
+
Genic
-926
NZ_LR595897.1
1712075
1712087
ACACGC
12
+
2
CACGCA
UKMR15_RS24460
1711057
1712127
+
Genic
-1018
NZ_LR595897.1
1712791
1712809
ATCGGC
18
+
3
ATCGGC
UKMR15_RS24470
1712889
1714187
-
Intergenic
80
NZ_LR595897.1
1713026
1713038
CG
12
+
6
CG
UKMR15_RS24470
1712889
1714187
-
Genic
-137
NZ_LR595897.1
1713236
1713249
CCCGCG
13
+
2
CCCGCG
UKMR15_RS24470
1712889
1714187
-
Genic
-347
NZ_LR595897.1
1713592
1713604
ACCGCG
12
+
2
CCGCGA
UKMR15_RS24470
1712889
1714187
-
Genic
-703
NZ_LR595897.1
1713750
1713762
ACGCCG
12
-
2
GCGTCG
UKMR15_RS24470
1712889
1714187
-
Genic
-861
NZ_LR595897.1
1715930
1715942
CCG
12
+
4
CCG
ilvA
1714961
1716589
-
Genic
-969
NZ_LR595897.1
1716776
1716788
CCG
12
+
4
CGC
ilvA
1714961
1716589
-
Intergenic
-1815
NZ_LR595897.1
1717243
1717255
ACGCCG
12
+
2
ACGCCG
UKMR15_RS24485
1716977
1717234
+
Intergenic
-266
NZ_LR595897.1
1718838
1718851
ACAGCG
13
+
2
CGACAG
UKMR15_RS24495
1718701
1720197
-
Genic
-137
NZ_LR595897.1
1719078
1719091
AACACG
13
-
2
GTTCGT
UKMR15_RS24495
1718701
1720197
-
Genic
-377