Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 8551 to 8575 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
1731532
1731544
ATCCGC
12
-
2
CGGATG
UKMR15_RS24540
1730799
1731317
+
Intergenic
-733
NZ_LR595897.1
1732586
1732599
ACGCGC
13
+
2
CACGCG
UKMR15_RS24545
1731853
1736652
+
Genic
-733
NZ_LR595897.1
1733271
1733283
CCGCG
12
-
2
CGGCG
UKMR15_RS24545
1731853
1736652
+
Genic
-1418
NZ_LR595897.1
1733330
1733343
CCGCG
13
-
2
GCGGC
UKMR15_RS24545
1731853
1736652
+
Genic
-1477
NZ_LR595897.1
1733522
1733534
ACGCGC
12
-
2
GCGCGT
UKMR15_RS24545
1731853
1736652
+
Genic
-1669
NZ_LR595897.1
1733727
1733740
CCGCGG
13
+
2
GCGGCC
UKMR15_RS24545
1731853
1736652
+
Genic
-1874
NZ_LR595897.1
1734261
1734274
ACAGCG
13
-
2
CTGTCG
UKMR15_RS24545
1731853
1736652
+
Genic
-2408
NZ_LR595897.1
1734377
1734390
AGCGCC
13
-
2
GCGCTG
UKMR15_RS24545
1731853
1736652
+
Genic
-2524
NZ_LR595897.1
1734965
1734977
CCCG
12
-
3
GGCG
UKMR15_RS24545
1731853
1736652
+
Genic
-3112
NZ_LR595897.1
1734976
1734988
CCGCG
12
-
2
GCGCG
UKMR15_RS24545
1731853
1736652
+
Genic
-3123
NZ_LR595897.1
1734986
1734999
AGCGCG
13
-
2
GCTCGC
UKMR15_RS24545
1731853
1736652
+
Genic
-3133
NZ_LR595897.1
1736398
1736410
ATCCCG
12
+
2
CGATCC
UKMR15_RS24545
1731853
1736652
+
Genic
-4545
NZ_LR595897.1
1736425
1736437
CCGG
12
+
3
GCCG
UKMR15_RS24545
1731853
1736652
+
Genic
-4572
NZ_LR595897.1
1736579
1736592
AACGCG
13
-
2
GTTCGC
UKMR15_RS24545
1731853
1736652
+
Genic
-4726
NZ_LR595897.1
1736966
1736979
CCGCG
13
+
2
CGCCG
UKMR15_RS24550
1737270
1738565
+
Intergenic
291
NZ_LR595897.1
1737969
1737982
ACCGCG
13
-
2
TCGCGG
UKMR15_RS24550
1737270
1738565
+
Genic
-699
NZ_LR595897.1
1738018
1738032
ACGAGC
14
-
2
CGTGCT
UKMR15_RS24550
1737270
1738565
+
Genic
-748
NZ_LR595897.1
1738774
1738786
ACCGAG
12
+
2
AGACCG
UKMR15_RS24555
1738803
1739558
+
Intergenic
17
NZ_LR595897.1
1740321
1740333
AGCGC
12
+
2
GCAGC
UKMR15_RS24565
1740136
1740378
+
Genic
-185
NZ_LR595897.1
1740660
1740674
ACGATC
14
+
2
CACGAT
UKMR15_RS24570
1740412
1741530
+
Genic
-248
NZ_LR595897.1
1740973
1740986
AGAGCC
13
+
2
AGAGCC
UKMR15_RS24570
1740412
1741530
+
Genic
-561
NZ_LR595897.1
1741508
1741520
CCG
12
-
4
GCG
UKMR15_RS24570
1740412
1741530
+
Genic
-1096
NZ_LR595897.1
1743307
1743321
ACGCC
14
+
2
CGCCA
UKMR15_RS24585
1743333
1744802
-
Intergenic
12
NZ_LR595897.1
1743457
1743469
ACGCCG
12
+
2
CGACGC
UKMR15_RS24585
1743333
1744802
-
Genic
-124
NZ_LR595897.1
1745528
1745540
ACGATG
12
-
2
ATCGTC
UKMR15_RS24595
1745515
1746186
+
Genic
-13