Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 8601 to 8625 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
1758345
1758357
CCGCG
12
-
2
GCGCG
UKMR15_RS24645
1757766
1758800
-
Genic
-579
NZ_LR595897.1
1758417
1758432
CCCGCG
15
+
2
GCGCCC
UKMR15_RS24645
1757766
1758800
-
Genic
-651
NZ_LR595897.1
1758834
1758846
CCGCG
12
-
2
GCGGC
UKMR15_RS24650
1758797
1759741
-
Genic
-37
NZ_LR595897.1
1760026
1760038
AAGCGG
12
-
2
TTCCGC
UKMR15_RS24650
1758797
1759741
-
Intergenic
-1229
NZ_LR595897.1
1760422
1760434
ACGCCG
12
-
2
TCGGCG
UKMR15_RS24650
1758797
1759741
-
Intergenic
-1625
NZ_LR595897.1
1760772
1760786
ACCGAT
14
+
2
ACCGAT
UKMR15_RS24650
1758797
1759741
-
Intergenic
-1975
NZ_LR595897.1
1760890
1760903
AACGCG
13
-
2
TCGCGT
UKMR15_RS24650
1758797
1759741
-
Intergenic
-2093
NZ_LR595897.1
1760911
1760923
ACG
12
-
4
TCG
UKMR15_RS24650
1758797
1759741
-
Intergenic
-2114
NZ_LR595897.1
1761692
1761704
ACGCCG
12
+
2
CGACGC
UKMR15_RS24660
1762780
1763979
-
Intergenic
1076
NZ_LR595897.1
1761794
1761808
ACG
14
+
4
CGA
UKMR15_RS24660
1762780
1763979
-
Intergenic
972
NZ_LR595897.1
1761824
1761838
CCCGCG
14
+
2
GCCCGC
UKMR15_RS24660
1762780
1763979
-
Intergenic
942
NZ_LR595897.1
1761907
1761920
AGCCCG
13
+
2
CCGAGC
UKMR15_RS24660
1762780
1763979
-
Intergenic
860
NZ_LR595897.1
1763405
1763417
AGCGCG
12
+
2
CGAGCG
UKMR15_RS24660
1762780
1763979
-
Genic
-625
NZ_LR595897.1
1764280
1764293
CCGCG
13
-
2
GCGCG
UKMR15_RS24665
1764174
1764509
+
Genic
-106
NZ_LR595897.1
1767235
1767247
CCG
12
-
4
CGG
UKMR15_RS24680
1767232
1767582
-
Genic
-3
NZ_LR595897.1
1767561
1767573
ACCTCG
12
+
2
CTCGAC
UKMR15_RS24680
1767232
1767582
-
Genic
-329
NZ_LR595897.1
1768270
1768285
ACCGCC
15
+
2
CGCCAC
ileS
1768112
1771033
-
Genic
-158
NZ_LR595897.1
1768422
1768436
CCGCG
14
+
2
GCGCC
ileS
1768112
1771033
-
Genic
-310
NZ_LR595897.1
1769686
1769698
AGGCG
12
-
2
CCTCG
ileS
1768112
1771033
-
Genic
-1574
NZ_LR595897.1
1770048
1770060
ACGGGC
12
-
2
TGCCCG
ileS
1768112
1771033
-
Genic
-1936
NZ_LR595897.1
1770390
1770402
ACGCGC
12
+
2
CGCGCA
ileS
1768112
1771033
-
Genic
-2278
NZ_LR595897.1
1770627
1770639
AGCGGC
12
-
2
GCCGCT
ileS
1768112
1771033
-
Genic
-2515
NZ_LR595897.1
1770894
1770907
CCG
13
+
4
CCG
ileS
1768112
1771033
-
Genic
-2782
NZ_LR595897.1
1771134
1771146
AGCGG
12
+
2
CGGAG
UKMR15_RS24690
1771117
1772055
-
Genic
-17
NZ_LR595897.1
1771886
1771898
AGCGCG
12
+
2
GCGCGA
UKMR15_RS24690
1771117
1772055
-
Genic
-769