Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 8351 to 8375 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
1607809
1607821
ACGCCC
12
+
2
CACGCC
UKMR15_RS24110
1608101
1609885
+
Intergenic
280
NZ_LR595897.1
1608138
1608150
ACGGCG
12
-
2
CGTCGC
UKMR15_RS24110
1608101
1609885
+
Genic
-37
NZ_LR595897.1
1608283
1608295
AGGGCC
12
+
2
GGCCAG
UKMR15_RS24110
1608101
1609885
+
Genic
-182
NZ_LR595897.1
1608867
1608879
AGGC
12
+
3
GCAG
UKMR15_RS24110
1608101
1609885
+
Genic
-766
NZ_LR595897.1
1608913
1608925
AGCGCG
12
-
2
CTCGCG
UKMR15_RS24110
1608101
1609885
+
Genic
-812
NZ_LR595897.1
1609865
1609878
AAGGCG
13
+
2
AGGCGA
UKMR15_RS24110
1608101
1609885
+
Genic
-1764
NZ_LR595897.1
1611488
1611502
ACCGCG
14
+
2
CGACCG
UKMR15_RS24120
1611382
1612155
+
Genic
-106
NZ_LR595897.1
1611766
1611778
ACGATC
12
+
2
CGATCA
UKMR15_RS24120
1611382
1612155
+
Genic
-384
NZ_LR595897.1
1614152
1614165
AACGTG
13
-
2
GTTCAC
UKMR15_RS24130
1613884
1614660
+
Genic
-268
NZ_LR595897.1
1616351
1616363
ACGGCC
12
+
2
ACGGCC
UKMR15_RS24140
1616327
1617295
+
Genic
-24
NZ_LR595897.1
1617044
1617056
AGCCCG
12
-
2
GGCTCG
UKMR15_RS24140
1616327
1617295
+
Genic
-717
NZ_LR595897.1
1619148
1619160
ACGAGC
12
+
2
GCACGA
UKMR15_RS24150
1618880
1620631
-
Genic
-268
NZ_LR595897.1
1619515
1619527
AGCCCC
12
+
2
CAGCCC
UKMR15_RS24150
1618880
1620631
-
Genic
-635
NZ_LR595897.1
1620093
1620107
CCG
14
+
4
CGC
UKMR15_RS24150
1618880
1620631
-
Genic
-1213
NZ_LR595897.1
1620131
1620148
ACGAGC
17
+
2
AGCACG
UKMR15_RS24150
1618880
1620631
-
Genic
-1251
NZ_LR595897.1
1621048
1621060
ATCCCG
12
+
2
CCCGAT
UKMR15_RS24150
1618880
1620631
-
Intergenic
-2168
NZ_LR595897.1
1621185
1621197
CCCGCG
12
+
2
CGCCCG
UKMR15_RS24150
1618880
1620631
-
Intergenic
-2305
NZ_LR595897.1
1621223
1621235
AACCG
12
+
2
CGAAC
UKMR15_RS24150
1618880
1620631
-
Intergenic
-2343
NZ_LR595897.1
1622764
1622776
CCCCCG
12
+
2
CCCGCC
UKMR15_RS24155
1621861
1622763
+
Intergenic
-903
NZ_LR595897.1
1623136
1623149
AGCGCG
13
-
2
CTCGCG
UKMR15_RS24160
1622864
1624837
+
Genic
-272
NZ_LR595897.1
1624103
1624118
AACGGG
15
-
2
CGTTCC
UKMR15_RS24160
1622864
1624837
+
Genic
-1239
NZ_LR595897.1
1624659
1624671
AACGCC
12
+
2
CAACGC
UKMR15_RS24160
1622864
1624837
+
Genic
-1795
NZ_LR595897.1
1624696
1624708
CCGCGG
12
+
2
GCCGCG
UKMR15_RS24160
1622864
1624837
+
Genic
-1832
NZ_LR595897.1
1624960
1624973
ACGCGC
13
+
2
CGCACG
UKMR15_RS24165
1624851
1625207
+
Genic
-109
NZ_LR595897.1
1625421
1625433
ATCGCG
12
+
2
CGATCG
UKMR15_RS24170
1625436
1625714
+
Intergenic
3