Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 851 to 875 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
537800
537812
ACGCG
12
-
2
GCGTC
UKMR15_RS02450
535657
538512
-
Genic
-2143
NZ_LR595896.1
537864
537876
CG
12
+
6
GC
UKMR15_RS02450
535657
538512
-
Genic
-2207
NZ_LR595896.1
540050
540063
ACGCCG
13
+
2
CGACGC
UKMR15_RS02460
538980
541424
-
Genic
-1070
NZ_LR595896.1
540374
540386
ATCCG
12
-
2
GATCG
UKMR15_RS02460
538980
541424
-
Genic
-1394
NZ_LR595896.1
541660
541672
CCGCG
12
-
2
CGGCG
UKMR15_RS02465
541471
541812
+
Genic
-189
NZ_LR595896.1
542672
542685
ATCGGC
13
-
2
GCCGAT
ftsY
542610
543929
-
Genic
-62
NZ_LR595896.1
542972
542985
CG
13
+
6
GC
ftsY
542610
543929
-
Genic
-362
NZ_LR595896.1
543517
543529
CCCGCG
12
-
2
CGGGCG
ftsY
542610
543929
-
Genic
-907
NZ_LR595896.1
543624
543636
CCG
12
-
4
GCG
ftsY
542610
543929
-
Genic
-1014
NZ_LR595896.1
544434
544447
CCGCG
13
-
2
GCGCG
rsmD
544181
544807
+
Genic
-253
NZ_LR595896.1
544743
544756
CCGCG
13
-
2
GGCGC
rsmD
544181
544807
+
Genic
-562
NZ_LR595896.1
545278
545290
ACCAGT
12
+
2
ACCAGT
coaD
544918
545418
+
Genic
-360
NZ_LR595896.1
546208
546220
ACGAGG
12
-
2
CCTCGT
UKMR15_RS02495
545925
546995
-
Genic
-283
NZ_LR595896.1
546524
546537
AACCCG
13
-
2
GTTCGG
UKMR15_RS02495
545925
546995
-
Genic
-599
NZ_LR595896.1
547281
547293
ATCGGC
12
-
2
GCCGAT
pth
547084
547689
-
Genic
-197
NZ_LR595896.1
547371
547383
AAGCTC
12
-
2
GAGCTT
pth
547084
547689
-
Genic
-287
NZ_LR595896.1
547454
547466
AGCGCG
12
+
2
GCGCGA
pth
547084
547689
-
Genic
-370
NZ_LR595896.1
547817
547829
AAGGCG
12
-
2
TTCGCC
UKMR15_RS02505
547803
548417
-
Genic
-14
NZ_LR595896.1
548019
548033
AAATCG
14
-
2
TCGATT
UKMR15_RS02505
547803
548417
-
Genic
-216
NZ_LR595896.1
550154
550166
AAGACG
12
+
2
CGAAGA
ispE
549715
550596
-
Genic
-439
NZ_LR595896.1
551194
551208
CCGCGG
14
+
2
GCGGCC
lolB
550630
551265
-
Genic
-564
NZ_LR595896.1
551225
551237
CG
12
+
6
CG
lolB
550630
551265
-
Genic
-595
NZ_LR595896.1
552220
552233
AGCGCG
13
+
2
GCGCGA
UKMR15_RS02530
551262
553082
-
Genic
-958
NZ_LR595896.1
552769
552782
AGCGCG
13
+
2
GCGCGA
UKMR15_RS02530
551262
553082
-
Genic
-1507
NZ_LR595896.1
553682
553695
ACGCCG
13
-
2
CGTCGG
mutM
553171
554001
+
Genic
-511