Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 901 to 925 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
565466
565479
AGCGCG
13
-
2
TCGCGC
UKMR15_RS02600
564890
566899
+
Genic
-576
NZ_LR595896.1
565616
565628
AGCGCG
12
-
2
CGCTCG
UKMR15_RS02600
564890
566899
+
Genic
-726
NZ_LR595896.1
565778
565790
ACGAGC
12
-
2
TGCTCG
UKMR15_RS02600
564890
566899
+
Genic
-888
NZ_LR595896.1
565882
565895
AGCCCG
13
-
2
GGGCTC
UKMR15_RS02600
564890
566899
+
Genic
-992
NZ_LR595896.1
566206
566219
AGATCG
13
-
2
CTCGAT
UKMR15_RS02600
564890
566899
+
Genic
-1316
NZ_LR595896.1
566236
566249
CCG
13
-
4
GCG
UKMR15_RS02600
564890
566899
+
Genic
-1346
NZ_LR595896.1
566620
566632
ACG
12
+
4
GAC
UKMR15_RS02600
564890
566899
+
Genic
-1730
NZ_LR595896.1
568130
568142
ACGCCG
12
-
2
TCGGCG
UKMR15_RS02610
567641
568255
+
Genic
-489
NZ_LR595896.1
568138
568150
CCCGCG
12
-
2
GGCGCG
UKMR15_RS02610
567641
568255
+
Genic
-497
NZ_LR595896.1
568900
568913
AGCGGC
13
-
2
CTGCCG
UKMR15_RS02615
568268
569125
+
Genic
-632
NZ_LR595896.1
569099
569113
CCG
14
+
4
CGC
UKMR15_RS02615
568268
569125
+
Genic
-831
NZ_LR595896.1
570106
570118
CCCGCG
12
-
2
GCGGGC
purU
569177
570058
+
Intergenic
-929
NZ_LR595896.1
570660
570672
ACGAGC
12
+
2
ACGAGC
UKMR15_RS02625
570357
571442
-
Genic
-303
NZ_LR595896.1
571030
571045
ACGCGC
15
-
2
GCGTGC
UKMR15_RS02625
570357
571442
-
Genic
-673
NZ_LR595896.1
572585
572598
AGATCG
13
+
2
AGATCG
uvrA
571643
574510
-
Genic
-942
NZ_LR595896.1
573486
573498
ACATCG
12
-
2
TGTCGA
uvrA
571643
574510
-
Genic
-1843
NZ_LR595896.1
573581
573593
ACAGCG
12
+
2
AGCGAC
uvrA
571643
574510
-
Genic
-1938
NZ_LR595896.1
575145
575159
ATCGCC
14
-
2
GGCGAT
UKMR15_RS02635
574724
575911
+
Genic
-421
NZ_LR595896.1
575382
575394
ACGAGC
12
-
2
CGTGCT
UKMR15_RS02635
574724
575911
+
Genic
-658
NZ_LR595896.1
576139
576151
AAGGAC
12
+
2
ACAAGG
ssb
576025
576579
+
Genic
-114
NZ_LR595896.1
576333
576346
AGATGC
13
+
2
CAGATG
ssb
576025
576579
+
Genic
-308
NZ_LR595896.1
576405
576419
CCG
14
-
4
GGC
ssb
576025
576579
+
Genic
-380
NZ_LR595896.1
576780
576793
ACGGCT
13
-
2
GTAGCC
UKMR15_RS02645
576691
577422
-
Genic
-89
NZ_LR595896.1
576806
576818
ACGCCG
12
-
2
CGTCGG
UKMR15_RS02645
576691
577422
-
Genic
-115
NZ_LR595896.1
577275
577287
AGAGCG
12
-
2
TCTCGC
UKMR15_RS02645
576691
577422
-
Genic
-584