Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 926 to 950 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595896.1
577493
577505
CCGCG
12
+
2
CGCCG
UKMR15_RS02645
576691
577422
-
Intergenic
-802
NZ_LR595896.1
577618
577631
CCGCG
13
-
2
CGCGG
UKMR15_RS02650
577770
579350
+
Intergenic
139
NZ_LR595896.1
577743
577755
AACAAG
12
+
2
CAAGAA
UKMR15_RS02650
577770
579350
+
Intergenic
15
NZ_LR595896.1
578625
578637
AACGC
12
-
2
GCGTT
UKMR15_RS02650
577770
579350
+
Genic
-855
NZ_LR595896.1
578770
578784
CCGG
14
+
3
GCCG
UKMR15_RS02650
577770
579350
+
Genic
-1000
NZ_LR595896.1
580069
580081
AATCGG
12
+
2
AATCGG
UKMR15_RS02660
579936
580253
-
Genic
-133
NZ_LR595896.1
583824
583836
ACGGGC
12
-
2
TGCCCG
UKMR15_RS02675
583346
589441
-
Genic
-478
NZ_LR595896.1
583963
583976
CCCGCG
13
+
2
GCCCGC
UKMR15_RS02675
583346
589441
-
Genic
-617
NZ_LR595896.1
584049
584063
CCGCGG
14
+
2
CGGCCG
UKMR15_RS02675
583346
589441
-
Genic
-703
NZ_LR595896.1
585219
585232
ACGCGC
13
+
2
GCACGC
UKMR15_RS02675
583346
589441
-
Genic
-1873
NZ_LR595896.1
586933
586949
ACG
16
-
5
CGT
UKMR15_RS02675
583346
589441
-
Genic
-3587
NZ_LR595896.1
587643
587655
AGATCG
12
+
2
CGAGAT
UKMR15_RS02675
583346
589441
-
Genic
-4297
NZ_LR595896.1
587857
587870
ACGGCG
13
-
2
GCCGTC
UKMR15_RS02675
583346
589441
-
Genic
-4511
NZ_LR595896.1
588324
588338
ACGAGC
14
+
2
CGAGCA
UKMR15_RS02675
583346
589441
-
Genic
-4978
NZ_LR595896.1
588679
588693
CCGCGG
14
+
2
GCGGCC
UKMR15_RS02675
583346
589441
-
Genic
-5333
NZ_LR595896.1
588693
588705
ACG
12
-
4
CGT
UKMR15_RS02675
583346
589441
-
Genic
-5347
NZ_LR595896.1
589125
589139
ACGCCG
14
+
2
CGCCGA
UKMR15_RS02675
583346
589441
-
Genic
-5779
NZ_LR595896.1
589245
589258
CCCGCG
13
+
2
CGCCCG
UKMR15_RS02675
583346
589441
-
Genic
-5899
NZ_LR595896.1
589567
589579
ACGCTC
12
-
2
GAGCGT
UKMR15_RS02680
589463
592729
-
Genic
-104
NZ_LR595896.1
589809
589822
ACGCTG
13
-
2
TCAGCG
UKMR15_RS02680
589463
592729
-
Genic
-346
NZ_LR595896.1
590785
590800
AGGCGC
15
-
2
CTGCGC
UKMR15_RS02680
589463
592729
-
Genic
-1322
NZ_LR595896.1
591081
591093
AGCGCG
12
+
2
GCGCGA
UKMR15_RS02680
589463
592729
-
Genic
-1618
NZ_LR595896.1
591106
591118
AGGCGC
12
-
2
CGCCTG
UKMR15_RS02680
589463
592729
-
Genic
-1643
NZ_LR595896.1
591396
591408
ATCGCG
12
+
2
TCGCGA
UKMR15_RS02680
589463
592729
-
Genic
-1933
NZ_LR595896.1
591630
591642
AGCGCG
12
+
2
GCGCGA
UKMR15_RS02680
589463
592729
-
Genic
-2167