Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 8826 to 8850 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
1934585
1934597
CCG
12
-
4
GCG
UKMR15_RS25355
1934146
1934628
+
Genic
-439
NZ_LR595897.1
1934747
1934765
ACGCGC
18
+
3
CGCACG
UKMR15_RS25360
1934771
1935913
-
Intergenic
6
NZ_LR595897.1
1936607
1936620
CCCGCG
13
+
2
CGCCCG
UKMR15_RS25365
1936054
1938048
-
Genic
-553
NZ_LR595897.1
1936665
1936678
CCCGCG
13
-
2
CGCGGG
UKMR15_RS25365
1936054
1938048
-
Genic
-611
NZ_LR595897.1
1937553
1937565
CCG
12
+
4
GCC
UKMR15_RS25365
1936054
1938048
-
Genic
-1499
NZ_LR595897.1
1938078
1938090
AACCG
12
-
2
GGTTC
UKMR15_RS25365
1936054
1938048
-
Intergenic
-2024
NZ_LR595897.1
1938184
1938196
ACGGCG
12
+
2
CGGCGA
UKMR15_RS25370
1938218
1939003
-
Intergenic
22
NZ_LR595897.1
1938276
1938288
CCCGCG
12
+
2
CCGCGC
UKMR15_RS25370
1938218
1939003
-
Genic
-58
NZ_LR595897.1
1938807
1938819
CCCGCG
12
+
2
CCGCGC
UKMR15_RS25370
1938218
1939003
-
Genic
-589
NZ_LR595897.1
1939811
1939823
CCGCG
12
+
2
GCGCC
UKMR15_RS25375
1939024
1940631
-
Genic
-787
NZ_LR595897.1
1941570
1941583
ACGCCG
13
+
2
CCGACG
UKMR15_RS25380
1940654
1941835
-
Genic
-916
NZ_LR595897.1
1942892
1942905
AGATCG
13
-
2
ATCTCG
UKMR15_RS25390
1942927
1943253
-
Intergenic
22
NZ_LR595897.1
1942928
1942940
ACGCCG
12
+
2
ACGCCG
UKMR15_RS25390
1942927
1943253
-
Genic
-1
NZ_LR595897.1
1943015
1943027
ACG
12
+
4
CGA
UKMR15_RS25390
1942927
1943253
-
Genic
-88
NZ_LR595897.1
1943438
1943450
ACGCGG
12
-
2
CGCGTC
UKMR15_RS25390
1942927
1943253
-
Intergenic
-511
NZ_LR595897.1
1943491
1943503
CCGG
12
+
3
GGCC
UKMR15_RS25390
1942927
1943253
-
Intergenic
-564
NZ_LR595897.1
1944928
1944941
AACCAG
13
-
2
CTGGTT
UKMR15_RS25400
1946054
1947661
+
Intergenic
1113
NZ_LR595897.1
1946065
1946077
CCGGCG
12
+
2
GCGCCG
UKMR15_RS25400
1946054
1947661
+
Genic
-11
NZ_LR595897.1
1946808
1946820
ACG
12
-
4
CGT
UKMR15_RS25400
1946054
1947661
+
Genic
-754
NZ_LR595897.1
1947515
1947528
ACGCCG
13
+
2
CCGACG
UKMR15_RS25400
1946054
1947661
+
Genic
-1461
NZ_LR595897.1
1948629
1948641
ACGTCG
12
+
2
TCGACG
UKMR15_RS25410
1948125
1951511
+
Genic
-504
NZ_LR595897.1
1950280
1950294
CCCGCG
14
+
2
CCGCGC
UKMR15_RS25410
1948125
1951511
+
Genic
-2155
NZ_LR595897.1
1950611
1950624
ACCGCG
13
+
2
CGCGAC
UKMR15_RS25410
1948125
1951511
+
Genic
-2486
NZ_LR595897.1
1951238
1951252
ACGCGC
14
+
2
GCGCAC
UKMR15_RS25410
1948125
1951511
+
Genic
-3113
NZ_LR595897.1
1951519
1951531
AAACGG
12
-
2
TTTCCG
UKMR15_RS25415
1951498
1952862
+
Genic
-21