Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 8776 to 8800 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
1897181
1897195
ATCGCG
14
+
2
CGCGAT
UKMR15_RS25245
1896583
1897905
+
Genic
-598
NZ_LR595897.1
1897480
1897494
AACGCG
14
-
2
CGTTCG
UKMR15_RS25245
1896583
1897905
+
Genic
-897
NZ_LR595897.1
1897630
1897642
AACAGG
12
-
2
TCCTGT
UKMR15_RS25245
1896583
1897905
+
Genic
-1047
NZ_LR595897.1
1899454
1899467
CCGCG
13
+
2
CGCCG
UKMR15_RS25255
1898791
1899762
+
Genic
-663
NZ_LR595897.1
1901002
1901014
AACGAG
12
-
2
TCGTTC
UKMR15_RS25260
1900658
1901350
+
Genic
-344
NZ_LR595897.1
1901087
1901099
ATCGGC
12
-
2
CGATGC
UKMR15_RS25260
1900658
1901350
+
Genic
-429
NZ_LR595897.1
1901268
1901280
AGCGCG
12
-
2
CGCGCT
UKMR15_RS25260
1900658
1901350
+
Genic
-610
NZ_LR595897.1
1905318
1905330
ACGTCG
12
+
2
CGTCGA
UKMR15_RS25275
1904570
1905568
-
Genic
-748
NZ_LR595897.1
1905707
1905722
AGCGCG
15
+
2
GCGAGC
choW
1905691
1906593
-
Genic
-16
NZ_LR595897.1
1906145
1906157
AGGCCG
12
+
2
GGCCGA
choW
1905691
1906593
-
Genic
-454
NZ_LR595897.1
1907554
1907567
AGCCGG
13
+
2
GCCGGA
UKMR15_RS25285
1906586
1908325
-
Genic
-968
NZ_LR595897.1
1909115
1909127
AACGCG
12
-
2
TCGCGT
UKMR15_RS25290
1908536
1909198
+
Genic
-579
NZ_LR595897.1
1909561
1909573
ATCGGC
12
+
2
GCATCG
UKMR15_RS25295
1909779
1909994
+
Intergenic
206
NZ_LR595897.1
1909628
1909652
CCCGCG
24
+
4
CGCGCC
UKMR15_RS25295
1909779
1909994
+
Intergenic
127
NZ_LR595897.1
1911938
1911952
CCGCG
14
-
2
GCGCG
UKMR15_RS25310
1911787
1912266
+
Genic
-151
NZ_LR595897.1
1916114
1916129
ACCTCG
15
+
2
ACCTCG
UKMR15_RS25325
1915029
1923302
+
Genic
-1085
NZ_LR595897.1
1917869
1917881
ACCTCG
12
+
2
TCGACC
UKMR15_RS25325
1915029
1923302
+
Genic
-2840
NZ_LR595897.1
1918275
1918287
CCGCGG
12
+
2
CGGCCG
UKMR15_RS25325
1915029
1923302
+
Genic
-3246
NZ_LR595897.1
1918943
1918955
ACCTCG
12
+
2
TCGACC
UKMR15_RS25325
1915029
1923302
+
Genic
-3914
NZ_LR595897.1
1919207
1919222
ACCTCG
15
+
2
ACCTCG
UKMR15_RS25325
1915029
1923302
+
Genic
-4178
NZ_LR595897.1
1919339
1919351
ACCTCG
12
+
2
TCGACC
UKMR15_RS25325
1915029
1923302
+
Genic
-4310
NZ_LR595897.1
1921541
1921553
ACCTCG
12
+
2
TCGACC
UKMR15_RS25325
1915029
1923302
+
Genic
-6512
NZ_LR595897.1
1922446
1922458
ACGTCC
12
+
2
GTCCAC
UKMR15_RS25325
1915029
1923302
+
Genic
-7417
NZ_LR595897.1
1922528
1922540
ACCTCG
12
+
2
TCGACC
UKMR15_RS25325
1915029
1923302
+
Genic
-7499
NZ_LR595897.1
1922596
1922608
ACGTCC
12
+
2
GTCCAC
UKMR15_RS25325
1915029
1923302
+
Genic
-7567