Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 8726 to 8750 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
1845017
1845043
ACGCGG
26
+
4
GACGCG
UKMR15_RS25005
1843998
1845254
+
Genic
-1019
NZ_LR595897.1
1845043
1845060
ACCCGC
17
-
2
TGCGGG
UKMR15_RS25005
1843998
1845254
+
Genic
-1045
NZ_LR595897.1
1845061
1845120
ACCCGC
59
-
9
TGCGGG
UKMR15_RS25005
1843998
1845254
+
Genic
-1063
NZ_LR595897.1
1846435
1846447
AGC
12
+
4
GCA
UKMR15_RS25015
1846071
1846775
-
Genic
-364
NZ_LR595897.1
1847655
1847667
AAGCCG
12
-
2
TTCGGC
UKMR15_RS25020
1847011
1847739
-
Genic
-644
NZ_LR595897.1
1848915
1848928
ACCGTC
13
+
2
CCGTCA
UKMR15_RS25025
1848867
1849418
-
Genic
-48
NZ_LR595897.1
1849256
1849268
ACCGCG
12
+
2
CGCGAC
UKMR15_RS25025
1848867
1849418
-
Genic
-389
NZ_LR595897.1
1849538
1849550
CCGCG
12
-
2
GCGCG
UKMR15_RS25025
1848867
1849418
-
Intergenic
-671
NZ_LR595897.1
1850362
1850376
ACCGGC
14
+
2
GCACCG
cydB
1850064
1851074
-
Genic
-298
NZ_LR595897.1
1851512
1851527
AGCCCG
15
+
2
CGAGCC
UKMR15_RS25040
1851064
1852509
-
Genic
-448
NZ_LR595897.1
1851551
1851563
ACCGCC
12
+
2
CCACCG
UKMR15_RS25040
1851064
1852509
-
Genic
-487
NZ_LR595897.1
1851872
1851884
CG
12
+
6
GC
UKMR15_RS25040
1851064
1852509
-
Genic
-808
NZ_LR595897.1
1852941
1852953
CCGCG
12
-
2
CGGCG
UKMR15_RS25045
1852744
1853169
-
Genic
-197
NZ_LR595897.1
1854236
1854248
ATCGCG
12
+
2
GATCGC
UKMR15_RS25055
1854082
1854414
+
Genic
-154
NZ_LR595897.1
1854429
1854444
CCCGCG
15
+
2
CGCCCG
UKMR15_RS25055
1854082
1854414
+
Intergenic
-347
NZ_LR595897.1
1854998
1855010
AGCGCG
12
-
2
CGCGCT
UKMR15_RS25060
1854485
1856671
+
Genic
-513
NZ_LR595897.1
1856693
1856706
ACGCCC
13
+
2
CACGCC
UKMR15_RS25065
1856668
1857684
+
Genic
-25
NZ_LR595897.1
1856770
1856782
CG
12
+
6
GC
UKMR15_RS25065
1856668
1857684
+
Genic
-102
NZ_LR595897.1
1857338
1857350
CCCGCG
12
+
2
CGCGCC
UKMR15_RS25065
1856668
1857684
+
Genic
-670
NZ_LR595897.1
1857870
1857882
AGCGCG
12
-
2
TCGCGC
UKMR15_RS25070
1857567
1858055
+
Genic
-303
NZ_LR595897.1
1858061
1858073
CCGCG
12
+
2
GCCGC
UKMR15_RS25070
1857567
1858055
+
Intergenic
-494
NZ_LR595897.1
1858152
1858164
AATCGC
12
-
2
ATTGCG
UKMR15_RS25070
1857567
1858055
+
Intergenic
-585
NZ_LR595897.1
1860142
1860155
CCG
13
+
4
CGC
UKMR15_RS25080
1859225
1860754
-
Genic
-917
NZ_LR595897.1
1860361
1860374
AAGGCG
13
-
2
TTCGCC
UKMR15_RS25080
1859225
1860754
-
Genic
-1136
NZ_LR595897.1
1861639
1861652
AAGCC
13
+
2
CCAAG
UKMR15_RS25085
1861851
1865654
-
Intergenic
199