Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 8701 to 8725 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
1825325
1825338
ATCGGC
13
+
2
TCGGCA
UKMR15_RS24915
1824941
1826377
+
Genic
-384
NZ_LR595897.1
1826086
1826098
ACACGT
12
+
2
TACACG
UKMR15_RS24915
1824941
1826377
+
Genic
-1145
NZ_LR595897.1
1828528
1828541
AGCCCG
13
+
2
CGAGCC
UKMR15_RS24930
1828389
1830560
-
Genic
-139
NZ_LR595897.1
1828630
1828642
ACGCGC
12
+
2
CGCGCA
UKMR15_RS24930
1828389
1830560
-
Genic
-241
NZ_LR595897.1
1829894
1829906
CCGCGG
12
+
2
GGCCGC
UKMR15_RS24930
1828389
1830560
-
Genic
-1505
NZ_LR595897.1
1830366
1830378
AGCGCC
12
+
2
GCCAGC
UKMR15_RS24930
1828389
1830560
-
Genic
-1977
NZ_LR595897.1
1831519
1831531
ACGCGC
12
+
2
GCACGC
UKMR15_RS24935
1831146
1831631
-
Genic
-373
NZ_LR595897.1
1831815
1831827
AGCCGC
12
-
2
GCGGCT
UKMR15_RS24940
1831670
1832602
-
Genic
-145
NZ_LR595897.1
1831847
1831859
CCCGCG
12
+
2
CCCGCG
UKMR15_RS24940
1831670
1832602
-
Genic
-177
NZ_LR595897.1
1833215
1833227
CCCG
12
+
3
CCGC
UKMR15_RS24945
1832819
1833079
-
Intergenic
-396
NZ_LR595897.1
1833787
1833800
AAGGCG
13
+
2
GCGAAG
UKMR15_RS24950
1833368
1833835
+
Genic
-419
NZ_LR595897.1
1834101
1834113
CCGCG
12
+
2
CGCCG
UKMR15_RS24955
1834196
1834411
-
Intergenic
83
NZ_LR595897.1
1834515
1834527
AGAGG
12
+
2
GAGGA
UKMR15_RS24960
1834612
1834815
-
Intergenic
85
NZ_LR595897.1
1834966
1834978
AATCG
12
-
2
CGATT
UKMR15_RS24960
1834612
1834815
-
Intergenic
-354
NZ_LR595897.1
1836246
1836258
AAGGCG
12
-
2
CGCCTT
UKMR15_RS24975
1836306
1836767
-
Intergenic
48
NZ_LR595897.1
1836481
1836493
AGCGCG
12
+
2
CGAGCG
UKMR15_RS24975
1836306
1836767
-
Genic
-175
NZ_LR595897.1
1836707
1836720
CCCGCG
13
+
2
CCCGCG
UKMR15_RS24975
1836306
1836767
-
Genic
-401
NZ_LR595897.1
1836963
1836978
CG
15
+
7
CG
UKMR15_RS24980
1836767
1837402
-
Genic
-196
NZ_LR595897.1
1839233
1839245
ACGCG
12
+
2
CGACG
UKMR15_RS24985
1837392
1840400
-
Genic
-1841
NZ_LR595897.1
1841185
1841197
AGCCCG
12
+
2
AGCCCG
UKMR15_RS24995
1841064
1842308
-
Genic
-121
NZ_LR595897.1
1842183
1842195
CCG
12
+
4
CCG
UKMR15_RS24995
1841064
1842308
-
Genic
-1119
NZ_LR595897.1
1842630
1842643
CCGCGG
13
+
2
CGCGGC
UKMR15_RS25000
1842325
1843710
-
Genic
-305
NZ_LR595897.1
1842850
1842862
CCCG
12
+
3
CGCC
UKMR15_RS25000
1842325
1843710
-
Genic
-525
NZ_LR595897.1
1844338
1844350
CCGCGG
12
+
2
CGCGGC
UKMR15_RS25005
1843998
1845254
+
Genic
-340
NZ_LR595897.1
1844656
1844668
AGCCGC
12
+
2
GCCGCA
UKMR15_RS25005
1843998
1845254
+
Genic
-658