Showing repeats of Burkholderia pseudomallei
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 8751 to 8775 repeats of 10659
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_LR595897.1
1863679
1863716
AGGCGC
37
-
6
CGCCTG
UKMR15_RS25085
1861851
1865654
-
Genic
-1828
NZ_LR595897.1
1865030
1865042
AAGGC
12
-
2
TTGCC
UKMR15_RS25085
1861851
1865654
-
Genic
-3179
NZ_LR595897.1
1867832
1867844
ACCGGG
12
-
2
CGGTCC
UKMR15_RS25095
1866266
1868074
-
Genic
-1566
NZ_LR595897.1
1869301
1869314
AATCCG
13
+
2
CCGAAT
UKMR15_RS25100
1868352
1869725
-
Genic
-949
NZ_LR595897.1
1871903
1871916
AAAGCG
13
-
2
CGCTTT
sctC
1870152
1871918
-
Genic
-1751
NZ_LR595897.1
1873185
1873197
AAGTCG
12
-
2
CTTCGA
UKMR15_RS25110
1871960
1873411
-
Genic
-1225
NZ_LR595897.1
1875090
1875102
ACCTCC
12
+
2
ACCTCC
sctN
1874928
1876277
-
Genic
-162
NZ_LR595897.1
1875526
1875538
ACGGCG
12
-
2
TCGCCG
sctN
1874928
1876277
-
Genic
-598
NZ_LR595897.1
1877950
1877962
AGCGC
12
-
2
GCGCT
sctJ
1877889
1878713
-
Genic
-61
NZ_LR595897.1
1879753
1879765
AACCTG
12
+
2
CCTGAA
UKMR15_RS25150
1879174
1879743
-
Intergenic
-579
NZ_LR595897.1
1880177
1880191
ATCGC
14
-
2
GCGAT
sctU
1880030
1881088
+
Genic
-147
NZ_LR595897.1
1880653
1880665
AACATG
12
-
2
TTCATG
sctU
1880030
1881088
+
Genic
-623
NZ_LR595897.1
1880668
1880681
AAGATG
13
+
2
AAGATG
sctU
1880030
1881088
+
Genic
-638
NZ_LR595897.1
1880832
1880844
ACCGCG
12
-
2
CGCGGT
sctU
1880030
1881088
+
Genic
-802
NZ_LR595897.1
1881184
1881197
AGCGGC
13
-
2
CTGCCG
sctV
1881104
1883221
+
Genic
-80
NZ_LR595897.1
1884973
1884986
AACTCG
13
+
2
CGAACT
sctQ
1884126
1885205
+
Genic
-847
NZ_LR595897.1
1886033
1886048
ACGATC
15
+
2
TCACGA
sctS
1885862
1886125
+
Genic
-171
NZ_LR595897.1
1887664
1887676
AGCCG
12
+
2
CGAGC
UKMR15_RS25190
1887226
1888275
+
Genic
-438
NZ_LR595897.1
1891788
1891801
AACGCG
13
-
2
CGCGTT
UKMR15_RS25215
1891396
1891878
-
Genic
-392
NZ_LR595897.1
1892009
1892021
CCCGCG
12
+
2
GCGCCC
UKMR15_RS25220
1891973
1892587
-
Genic
-36
NZ_LR595897.1
1892838
1892850
AGATCG
12
+
2
AGATCG
UKMR15_RS25225
1892778
1893482
+
Genic
-60
NZ_LR595897.1
1892859
1892871
ACCGGC
12
+
2
CCGGCA
UKMR15_RS25225
1892778
1893482
+
Genic
-81
NZ_LR595897.1
1893803
1893815
CCGCGG
12
+
2
GCCGCG
UKMR15_RS25230
1893561
1894451
+
Genic
-242
NZ_LR595897.1
1894325
1894337
AGCGGC
12
-
2
CCGCTG
UKMR15_RS25230
1893561
1894451
+
Genic
-764
NZ_LR595897.1
1895082
1895094
ATCGCG
12
+
2
ATCGCG
UKMR15_RS25235
1894474
1895841
+
Genic
-608